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Simple sequence repeat (SSR)
>UN09407
GCTCAATGTTTTTTATAATATTGGAAAAATAAATTACTCAATGTTTTTTATAATATTGGAAAAGCTTAGAAGGTCTAACCAGATCATAATCTTT
TTACTTAGAAAGAAAGCCCTAAACAGAAGGCCCAGAGGTTTAACCAGATAATAATCTTTTACATAGAAAGAAAGACCCTAAACAGAAGGCCCAA
ATAAGATTAGCTAATATTTCGTGGGAATAAATATGTTATCATAGTTGTGCTTGTGGGATCCTGAGCAAACTGGTAGCATCTTCATCATCAGAGG
AAGATGATGGGATCTCTCCTTGAGGTGTAGTTGTCTGCTCAACCATTTCTTTCTTGTTCCTGAAAACCTTGGAGACACACATCCCAGAATGGTT
TTCCAGCTTGAATTCCTCCATTCGCCATTCACTTGGCTCTTCCTTTGTGCCGTTCTTCAAGAAGAAGCTATACGGCATCTTTGTGCCCTTGAGA
TCACTGTTGGGGTCTTTGAACTCTTTCTTGCGACTACCTCGTCTCCATCTCCCGTGGGGAGTGTCGCGCTTGGTACGAGGGCCACTTTTGTACC
TACTCTGTAGGTTGGTAAAAAAGTACCACTCCTCTGTGGATTTGAGCTTGGAATGACCTGCTAAGTCCCAGGGATCGTGCTTGTAGATGTCAAG
ATCTGCAATGGCATCAGTCACCTCTTCGCTCAAGACTTTCCCCTTGAGGTAATAGAACAGCGTTTGCTCATCAGTAGGTCGAAAAAGGAACCCT
GGAGGAAGTGATACTGTCAACTGGAAAGTCTCTTCCGCTGAGGAAATGTTTACCGGCGGCGGCGGCGGCTGCGTCGAAACGGGATCAGCTACGT
CCATCGGCGGCAAAGACACGGGATTAGCTTCATATTCAGGCTCCATCTGCGCAGGGTTGTAGAGAAAGAGTATTTCTTTTTCCGATGAAAAGAG
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Primers for UN09407 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AAAAAGGAACCCTGGAGGAA |
59.912 |
20 |
GTAGCTGATCCCGTTTCGAC |
59.7 |
20 |
105 |
740 |
844 |
| 2 |
AAAAAGGAACCCTGGAGGAA |
59.912 |
20 |
GACGTAGCTGATCCCGTTTC |
59.7 |
20 |
108 |
740 |
847 |
| 3 |
TCAGTCACCTCTTCGCTCAA |
59.701 |
20 |
GACGTAGCTGATCCCGTTTC |
59.7 |
20 |
176 |
672 |
847 |
|
|
