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Simple sequence repeat (SSR)
>UN09440
GGAAACAGTAAAATTGTTTTTATTCCAGATACGATGATGATGATGATCTACGAACAAAGAAAACAGCATAAAGGGAAAGAGTTTTATTATTAGA
CGTAAGTTATAACTCTTATCCTCTTATCCTCTCTCAGATAATAGACATAATCTTGGATGAAGTCTCTATCTCACTAGCTTTCACGAACATAACC
TCGAATGGGCTAGCGAATGGTGGGGTAGAGCCTATAACCAAACCCCGAACGCCACCTTCCTCGTTTCTACCGACATCGGTGCAATCGTTACCGT
CCCTACAATATGCAAACTTGTAAGCGTTAGGGTTTTCACTAGTTTTCTTGATCTGGAAGAAACTCCTCGACGAATCTTCTCCTCCAGCTTCTGG
CTTAGGACCAACCGCTATGAAATACGATCTCCAGGGGCTGGGAGCTGGAGTGACCCACCAATAAGTTGACTCAGCGCAGAACGTAGGTTCGACA
TCCATCTTGATGTTGAGGTTCTCTGATTCGGGGACGAACCCAACTCTAGACCTCCAGTTTGAGAATTTCACGGGAATGCCCCTCCTGAGATCTG
AACGCTCCTGTCCGATAAAGAGGGGACACTGGTTGCCATTACGGGGGGTGAGAGTTAGGCCGCCACCTCCAGCGCCCCTGATGACGGAGATAGC
GTAGTAACTGCCGCCGAATATGATATCACCATTCACGTCGAGAACTGGTCCGGCGTTTGCGGTGGCAGCCAAAACAGCTGTTAGGG |
Primers for UN09440 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GAAACAGTAAAATTGTTTTTATTCCA |
57.144 |
26 |
CTCTACCCCACCATTCGCTA |
60.088 |
20 |
217 |
2 |
218 |
| 2 |
AAACAGTAAAATTGTTTTTATTCCAGA |
57.975 |
27 |
CTCTACCCCACCATTCGCTA |
60.088 |
20 |
216 |
3 |
218 |
| 3 |
GAAACAGTAAAATTGTTTTTATTCCAG |
57.975 |
27 |
CTCTACCCCACCATTCGCTA |
60.088 |
20 |
217 |
2 |
218 |
|
|
