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Simple sequence repeat (SSR)
>UN09549
GCATAAAATTGAGATTATTAAGCCATGTAGTACGTAAAACTGAAATCTGACGTAACACAATAACCTCAAGAGTTAATAACATGAAAATTTAGCA
TAGCTGCGAGTTATAAAGTCTGCAAACATTTATTCACATACCCAAGGCATGTAGAGGCACCACACCAAACCAACACAAAGGGAAAGATGATGAC
TCAAGTGAAAGTGACAATAACGCAACAAAGGATTTTTATTAAAAAACACCAAACATACTACTAGGCAAATAGTTATGAAGAGAACGATAAACCA
AATCAAGCCGAAGCAACTTGAGAGTGCTTCTCAAGCTTGGCTACGATTTCATCTTTCGCAGCACCGACCACCTTGTCGACCTTCTCTTCACCCT
TCATGTAGACAAAGGTCGGCATGGCCTCAACTTCGAAATCCTTAGCAACAGAATTCAATTCATCGACATCGACCTTGAAGAAAACGACATCAAG
GTGCTTCTTAGCCAACTCGACGAAGATGGGTGCAATGAAACGGCAAGGTGGGCACCATGTTGCTGTGAAGTCTATCACAATCAGTTTGTTGGAG
TCTTTGGCGGCCTTGAACTTGTTGTTCCAGTCATCGACGGTGTGGCAAGCGATCACTTCTCCTGCTGGGATCAATTCTGCTGGTGCGGCCATTT
TTCTCTGTTCTTTCTTTCTCTCTCTCTCTGTTTGATTTTGGATTTGTTTTTGATCCATAATTGCTTTGTCTTGGGGTCGGGTCTTATAG |
Primers for UN09549 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GGTGCTTCTTAGCCAACTCG |
60.015 |
20 |
ATAAGACCCGACCCCAAGAC |
60.19 |
20 |
276 |
470 |
745 |
| 2 |
CTGGGATCAATTCTGCTGGT |
60.073 |
20 |
ATAAGACCCGACCCCAAGAC |
60.19 |
20 |
117 |
629 |
745 |
| 3 |
GCTTCTTAGCCAACTCGACG |
60.154 |
20 |
ATAAGACCCGACCCCAAGAC |
60.19 |
20 |
273 |
473 |
745 |
|
|
