 |
Simple sequence repeat (SSR)
>UN00117
AGACATAGACCAGATCGAAGTGGCTTGCTTTAGCTCAGCTCCACTACACTGATCACAGCTCAGAGGTGATCTCCAGCAGGAGAAGCAGTAGGAG
GAGGAGGAGGAAGAGCAGCAATCGCTTCTTCTGCGCGCGTGGAAGCAAATGCTTCACATGTTTTCTTGAGCCAGTTGAGGCCCATGGTAAGAAA
ACACCGGTACCATTACCGGTTCCCATCACACTGGGACTTGATAGTACCATTGGTTGAACCGGCGGTGGTGCCATTATGACCATTGGTGGATGAA
GGACTCCGAGCTTTGGCATCATTTCAAGTGAATGATCATAGCCATTTAGGTATGGAGTCGGGGCCATTGAGTAGTGACATGGTTGTTGTTGCCA
CATTGTCATTACACCATCGTTGTGAGGACTGTTGTGGTGTATTTCAGGACGTACACGAAAGAATGTGATGCTTACTCTTTTGGTTTGTGATGGG
CACATTACATGCCTTGACATGTCTGCACTGTTTCCTCTCATCACCAACAGAGATCCTTGTTTGAGAGGAAGAGTTAAAGGTCCCTGAAGTTGCC
TTCGTTGTCACTAGAGAGAATACGTCCAAAGGCCATTGTGGATTCAGAGAGAACAAGAGTGGAGATTGGTTGTTCTAGATGAGGTGGTTTCAGG
AAAGGCTGTGAGTGTTCACCCTCTTCAAAGAAGTTGATGACACATCCATTTGGTCTCTTGTATTCTGGGATGAGTCTCCATGTGACAAAATGAT
CAATGACACTCTCGAGAAGTGGTGGAATTGGCTCGATGTTAACTGCAAAAAGTCTCTCCCGGTCAAGCAACCACTAGCATCAAAACCATTTAGA
CTGAGTCCTGCAGATCAAAGCGATGATTCCTTACCAGAGTTGGTGTTTTCATCCTTCACATGGCCAAAGATTGGGACACCAAGCTGAACCAGCT
CTCTCTTGTTCCCTTTTATCTGTTTGTTGAACAGGATAAAGGTCTCACCTGTATTCATGATCATGAGTAAGCACCAGAAAACTCTTTAGAAAGT
CATGTGATAGGGTAAGAAAAAGTGACCTGAAAGCTTCCCGTTTTGGCCAGCTTCTCGGAGATCAGCGACAAGGTCTATAAGTTTGGTTAACTCA
TCTTCTTTTAGTAACTCTTCATACATCTTTAGTCCTTTCACAACATTCACCTGTAAAAAAGATTCAATGAGCACTCATTTTACACCTCAAATGT
TCCATCAGAAGATCTCATTAAATTAAGGTGAAAAAGAAAAACGAATTTCACTACTCACAGTGTGGCCTTTCACTTGCTCTTTAGCTTGGAAACC
TTTGATAAGTTTGATCTCAGTTGACCTTGCATCACAATCTTCATGGTTCTGACATATAATCTGTGGAGTATCCGCAGCAGC |
Primers for UN00117 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GCTTGCTTTAGCTCAGCTCC |
59.504 |
20 |
TTCTTACCATGGGCCTCAAC |
59.933 |
20 |
165 |
23 |
187 |
| 2 |
CAGATCGAAGTGGCTTGCTT |
60.538 |
20 |
TTCTTACCATGGGCCTCAAC |
59.933 |
20 |
177 |
11 |
187 |
| 3 |
GCTTGCTTTAGCTCAGCTCC |
59.504 |
20 |
AGTCCCAGTGTGATGGGAAC |
59.817 |
20 |
204 |
23 |
226 |
|
|
