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Simple sequence repeat (SSR)
>UN00914
GGATTATACAAAAAAAAAGCCATAGCCTCACCTCATTCTCTCTCTCTCTCTCTCTCTCTCCCATTTTCACAGCCATTTGTTAGATTCCTCTATT
CTCTCTGTGCTTTTCTATGGGATTGTGTATTAGAGACTGATTAAGCTCAAAGGAACCCAAAAGATAATTCTTTCATTATCTTCCTTGTGTTTCA
ATTTTCTAAAGTTTTCTGGGCCATTTTTGTTTTTCCTCCAACGAATTTTCTACGAAGGAGACTTTTCAGTTTCTGGGCTTTATTTTTCGCAGTG
AAGCTTCTCAATACCCATAGAAGCGCTATACTGAAGAAACAATATTTACTATATTAATAAGAATTGTCCAGTCTTATATACTTGGTGATATTAT
AAATTTTTGTAAAAAAGAGAAAGAAGAGATGGGGAAGCAAGGGCCTTGCTATCACTGTGGAGTTACAAGCACACCTCTATGGCGAAACGGGCCA
CCAGAGAAGCCGGTACTGTGCAATGCTTGTGGCTCCAGATGGAGAACGAAAGGATCACTAGTAAACTACACGCCCCTTCATGCTCGTGCTGAAG
GTGATGAGGTTGAGATTGAAGATCGTAGAGGTCAGAAGAAGATGATGATGATTAATGGAATGTCTATGAACAAAAGGATTCCAAAGAAGAAACC
ACATCAAGAAAATTCCACTGTTAAGGAGTCAGTAACGGTTTCAGAAAAGGCATTAGAAGAGGAGCTAGCACAT |
Primers for UN00914 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AAAAAGCCATAGCCTCACCTC |
59.739 |
21 |
TGAGAAGCTTCACTGCGAAA |
59.864 |
20 |
279 |
14 |
292 |
| 2 |
AAAAAGCCATAGCCTCACCTC |
59.739 |
21 |
CTGCGAAAAATAAAGCCCAG |
59.847 |
20 |
267 |
14 |
280 |
| 3 |
AAAAAGCCATAGCCTCACCTC |
59.739 |
21 |
AGGAAAAACAAAAATGGCCC |
60.164 |
20 |
212 |
14 |
225 |
|
|
