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Simple sequence repeat (SSR)
>UN09566
AAACGGTAAGAAAAATAAAATTTCCACAAACTAACTTGTGAGGAAAGAGTGCTCTTTGATATGGTTCAAGGCTCTTTCACATTAAAAGAGTGAC
ATCGAAAACTCTCAAAGGCAAGACAAAAGGTAAAGGTAAGAAGCATCATCAGATCCCAGAGTTACACTCTCAAAACAAGAGATGCAAACAAACA
TCTTTACATGTCTGTGTATGCTGTTTCGCAGGAGAGAGCGAGACACACGCACACATATATATATATAGAGAGAGACATATGTGGAAACGTGTAA
AGCTAAGATCAATGCATTGGATGCCTCGGTGATCTGGGACGAACAGGTGTCTTCGAAGGACTGACCCTTATCGGTAAAGAACCTAGAACAACTC
CACTGCAGTTGAGAGCTGCTATCGCGCTTTCTGCCATCACGAACTCTACAAAAGCAATACGAGTTGAGTGTTGATAATCTCCAAGTAGCCTCAG
ACGGAAAACCTCTCCACAGAATGATTCAAAAAAGATCTTCACGTCTGATTGAGTCACCTTCTTGTCAATGTTAGTGCAATAGATAGTTCTTGCA
CACATCTCTCGTTCATCTTCAGTCCTGGGCAAGAAAGTAGGGTTAACAGGTGCAATAGCTGTTTTAGATGGCAGGACTTTCACAGGATAGAATC
CCAACATAGTCCCCGATAGATTCAGAGCAGTCATCGCACCCTCTTCATCAGTGAATTCAATGAAAGCAAAGCGAAGTACAGAGTTTGGGTCACC
ACATATGCGGCAATCAACAACCTGTCCACAGCTAACAAACAAACCAGCAAGCTGCTCTTCAGTGACCTGTTGATCGAGATCAGAGACATAGACG
GTTCTTCGGATGACATCTTCTCGCTGAGCCATGCTTGTTCGAGCATTCATCCTCCGTTTCCCTTGACCAAAGCTCTTCTTCCGTCGGAACCCGC
CGTTGACTTCGAGGGGGACATTTCCGGGAGGAGGAAAGCCATTGTTAGGGAAAAAGGAGGCAGGAGAGGAGGGGAAGAAACCACCACCGGCTTG
TTGTTTAGTGAGGGAGGGAGGGACGAACTCAGCAGCCATGGGATTGAGCTTAGAGAAAAGCTCCTGGAGCTCCCTCATCTCACGTTTGTAGCTC
TCCCCACCGTCTGATCCCTCCGATCTCGCCTCGTGGGATCCGATCTTGCTACTGTACAGACCTTCCTGATCGCCAAGCTCGATCCTTGGTGACT
GATGGCTCTGATCGCCGGAATCTTGACTTGTGGGCGGCGGCTGGACCACGACGGCTCCTGAATCTGCAGCAGCAACTCCAGCACTCTCAACAAC
CGCCATGATCGAAGGATATCTAGAGTACCCAGAGATCAAAATCTGAAATTTTGGAGGATGGGTTCACGATTCGAGGAAGAGAAGGAGAGGAATC
AGCATAAGGTGCTCTCTCCAAGGAGGAGGAGAAAAAGAAAGAGAGAGAAGAGAGAGAGAGAGATTGAGTTATTACCAGAGGATTGTTGTTAATA
AATGTG |
Primers for UN09566 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TGTATGCTGTTTCGCAGGAG |
60.011 |
20 |
CCGTCTGAGGCTACTTGGAG |
60.005 |
20 |
272 |
203 |
474 |
2 |
TGTATGCTGTTTCGCAGGAG |
60.011 |
20 |
ACCTGTTCGTCCCAGATCAC |
59.969 |
20 |
128 |
203 |
330 |
3 |
TGTATGCTGTTTCGCAGGAG |
60.011 |
20 |
GACACCTGTTCGTCCCAGAT |
59.969 |
20 |
131 |
203 |
333 |
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