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Simple sequence repeat (SSR)
>UN09566
AAACGGTAAGAAAAATAAAATTTCCACAAACTAACTTGTGAGGAAAGAGTGCTCTTTGATATGGTTCAAGGCTCTTTCACATTAAAAGAGTGAC
ATCGAAAACTCTCAAAGGCAAGACAAAAGGTAAAGGTAAGAAGCATCATCAGATCCCAGAGTTACACTCTCAAAACAAGAGATGCAAACAAACA
TCTTTACATGTCTGTGTATGCTGTTTCGCAGGAGAGAGCGAGACACACGCACACATATATATATATAGAGAGAGACATATGTGGAAACGTGTAA
AGCTAAGATCAATGCATTGGATGCCTCGGTGATCTGGGACGAACAGGTGTCTTCGAAGGACTGACCCTTATCGGTAAAGAACCTAGAACAACTC
CACTGCAGTTGAGAGCTGCTATCGCGCTTTCTGCCATCACGAACTCTACAAAAGCAATACGAGTTGAGTGTTGATAATCTCCAAGTAGCCTCAG
ACGGAAAACCTCTCCACAGAATGATTCAAAAAAGATCTTCACGTCTGATTGAGTCACCTTCTTGTCAATGTTAGTGCAATAGATAGTTCTTGCA
CACATCTCTCGTTCATCTTCAGTCCTGGGCAAGAAAGTAGGGTTAACAGGTGCAATAGCTGTTTTAGATGGCAGGACTTTCACAGGATAGAATC
CCAACATAGTCCCCGATAGATTCAGAGCAGTCATCGCACCCTCTTCATCAGTGAATTCAATGAAAGCAAAGCGAAGTACAGAGTTTGGGTCACC
ACATATGCGGCAATCAACAACCTGTCCACAGCTAACAAACAAACCAGCAAGCTGCTCTTCAGTGACCTGTTGATCGAGATCAGAGACATAGACG
GTTCTTCGGATGACATCTTCTCGCTGAGCCATGCTTGTTCGAGCATTCATCCTCCGTTTCCCTTGACCAAAGCTCTTCTTCCGTCGGAACCCGC
CGTTGACTTCGAGGGGGACATTTCCGGGAGGAGGAAAGCCATTGTTAGGGAAAAAGGAGGCAGGAGAGGAGGGGAAGAAACCACCACCGGCTTG
TTGTTTAGTGAGGGAGGGAGGGACGAACTCAGCAGCCATGGGATTGAGCTTAGAGAAAAGCTCCTGGAGCTCCCTCATCTCACGTTTGTAGCTC
TCCCCACCGTCTGATCCCTCCGATCTCGCCTCGTGGGATCCGATCTTGCTACTGTACAGACCTTCCTGATCGCCAAGCTCGATCCTTGGTGACT
GATGGCTCTGATCGCCGGAATCTTGACTTGTGGGCGGCGGCTGGACCACGACGGCTCCTGAATCTGCAGCAGCAACTCCAGCACTCTCAACAAC
CGCCATGATCGAAGGATATCTAGAGTACCCAGAGATCAAAATCTGAAATTTTGGAGGATGGGTTCACGATTCGAGGAAGAGAAGGAGAGGAATC
AGCATAAGGTGCTCTCTCCAAGGAGGAGGAGAAAAAGAAAGAGAGAGAAGAGAGAGAGAGAGATTGAGTTATTACCAGAGGATTGTTGTTAATA
AATGTG |
Primers for UN09566 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GGTTCACGATTCGAGGAAGA |
60.195 |
20 |
CACATTTATTAACAACAATCCTCTGG |
60.059 |
26 |
134 |
1377 |
1510 |
2 |
CAGCAACTCCAGCACTCTCA |
60.333 |
20 |
CACATTTATTAACAACAATCCTCTGG |
60.059 |
26 |
219 |
1292 |
1510 |
3 |
AGCAGCAACTCCAGCACTCT |
60.352 |
20 |
CACATTTATTAACAACAATCCTCTGG |
60.059 |
26 |
221 |
1290 |
1510 |
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