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Simple sequence repeat (SSR)
>UN09577
GGACACTCACTCCTTTCCTATTTCTTCGCTTTGCGTGCCCTTCCTTCTTCTTCTTCTTCTTATCAACAACTTGCATCAGCAAAAAGCTATAACT
ACCTAATACTATCATTTAATAAAGACCCCAACTTTCTTGTGACTTCTCTCTGTTCGTTCGCTGTGATCTCTCTGTTTCTCTCTCTTATCCGAAA
GAATCGATCTTTCGAAGTGGGTTCTCTTTGCTTGCTACTCTCGATATGGGTTCGTCTGTGGAGCAGAACATTCTTGTCACTGGCGGTGCTGGAT
TCATCGGGACGCATACCGTTGTTCAGCTCCTGAAGGAAGGTTTTAAGGTCTCGATCATCGATAACCTCGACAACTCTGTTATCGAAGCCGTCGA
CAGGGTTAGGGAGCTCGTTGGTCCTCATCTCTCCAAGAAGCTCAACTTTACTCAGGGTGATCTAAGAAACAAAGGTGATATTGAGAAACTCTTC
TCCAAACAGAGGTTTGATGCTGTGATCCATTTCGCGGGTCTTAAAGCTGTGGGTGAAAGTGTTGCCAACCCTCGCCGCTACTTTGACAACAACT
TGGTTGGAACTATCAATCTTTACGAGACCATGGCCAAGCACAACTGCAAAAACATGGTGTTTTCATCGTCTGCGACTGTGTATGGACAACCTGA
GAAGATTCCATGCATGGAAGACTTCGAGTTGAAGGCTATGAATCCTTACGGTCGTACTAAGCTCTTTCTTGAAGACATAGCTAGAGATATCCAG
GCGGCTGAACCAGAGTGGAGAATTGTGCTGCTGAGGTACTTCAATCCTGTGGGAGCGCACGAGAGCGGCAGAATTGGCGAGGATCCAAAGGGTA
TCCCCAATAACCTCATGCCTTACATACAGCAAGTAGCTGTTGGACGCCTACCTGAACTCAACGTCTATGGACATGACTATCCTACCGAGGATGG
CAGTGCGGTGAGGGACTACATCCATGTGATGGATTTGGCTGATGGACATATCGCTGCGCTAAGGAAGCTATTTGATGATCCAAAGATTGGCTGT
ACTGCTTACAATCTAGGGACTGGACGAGGAACGTCTGTGTTGGAGATGGTTGCTGCTTTTGAGAAAGCTTCTGGCAAGAAAATACCGATCAAGC
TTTGTCCGAGGAGGTCAGGAGATGCAACTGCAGTTTATGCTTCAACAGAGAGAGCTGAGAAAGAACTTGGCTGGAAGGCAAAGTATGGAGTGGA
CGAGATGTGCAGAGACCAGTGGAATTGGGCAAACAACAATCCATGGGGTTACCAGAAGAAGCATTGACTTTTCACTCTTTCTCTAATCACTCAA
TATACAAAGAAAAGTGTTAACATACACACATCATATAGTTTGCTTTGCTTTCCATGTAACGAACGGGTCTTGTTACCTCTATGAATAAAACAGC
TAGTTGACTGATGTATACATTCTATGGACCGTTCAAGATTCAGCAATACAAGAAGATTTATTTGT |
Primers for UN09577 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCCTATTTCTTCGCTTTGCG |
60.468 |
20 |
GAACCCACTTCGAAAGATCG |
59.67 |
20 |
197 |
16 |
212 |
| 2 |
TCCTATTTCTTCGCTTTGCG |
60.468 |
20 |
AGCAAAGAGAACCCACTTCG |
59.473 |
20 |
205 |
16 |
220 |
| 3 |
CCTATTTCTTCGCTTTGCGT |
59.496 |
20 |
AGCAAAGAGAACCCACTTCG |
59.473 |
20 |
204 |
17 |
220 |
|
|
