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Simple sequence repeat (SSR)
>UN09744
GTTTTGAAACACACGTCAGATATTATTTATTCTCAACTCGCATACAAGATGGCAAGTTCGTGACATCATGTTTTGACATCGACTCCACTAAAAC
GACGTTCTAAACGGACAAATGGACAATCACAGATAGCTACTTAAACACACGTGCGCACACACACACACAACAACCCAAAGTCTCTCGAACATTA
TCGAGAAATTTATTGAATAGAGAAAATACAAAAACAGTAGAACGATAGGGCCTCTCAGGTTTATGACAATGAAGTCTTTTAAGTGGTTTGTGAT
TTGACATGGCGAGCATAGAAGACTTTGAGCCTCAAGAAAGCGTCTTCTAGCATTGATCTCTCGACTCCAATTGAGATTCTCACCCAATTCTTCT
TGCCTAATGCCTCTCCAGGTAAAAGGACGAGGCTCTCCTCTCGGGCCAGCTTCATGCAGAAATCAACATCGTCTGTGATGTCCTCCAAGAGTGA
TAGGTCCAATTTTGTCACTAAGTAGGTACACGACTCAGGTTTCTTAGGGCAAACGAGGCAAGGAATCTCCTTGAGGGCATCGAACATCATATCT
ACGTTCTGCTTAAATGTCAGGTTTTTCTTCTCAAAGAAATCTTTCTTTGTCTTCTCCAAGATATTTGGAAGTGCAAACTGTAGAATTGTCGATG
GATCTGGACTTATGTTAAGAAAGTCCTTGATGGATTCAACGACCCCAGTGGTTTTGAAAACATTATTTGGATCATGCATCGCCATCCAACCTAT
TCTCCAGCCAGGGACGAGCCACCCCTTGGAAATGGGATCCGAGTGTAACCACAGGAGCAATCGATGCGAATATCCCCATCGGGACAAATGGATT
CTCTCCATATATTGTGTGCTTATAAACTTCATCAGAAATAACCACC |
Primers for UN09744 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TGGCAAGTTCGTGACATCAT |
60.12 |
20 |
CTTCTATGCTCGCCATGTCA |
59.972 |
20 |
254 |
50 |
303 |
2 |
TGGCAAGTTCGTGACATCAT |
60.12 |
20 |
AACCTGAGAGGCCCTATCGT |
60.096 |
20 |
200 |
50 |
249 |
3 |
CGGACAAATGGACAATCACA |
60.367 |
20 |
CGCCATGTCAAATCACAAAC |
59.972 |
20 |
188 |
106 |
293 |
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