 |
Simple sequence repeat (SSR)
>UN09778
CTGAAAAATAAAACCATATAATACTGAACTTGGTAGAAAGATACACAAGAAAAATGATCTCAAAAGCTTAGAAGAAATGAACAAAGCACACTCT
AAAATCTTTCCTGTTTTCGTATCAGAGAATAACAAACTCAGAAGAAAAGAAAAAAAGAATAAACAAAAGCCATTGATGTATTTTTGTACCTCGT
TTTCTTAAGGATGAAAGATACGAGATACTTATATATAGAGAGAAAGTAGGAGATTACTGGTTTTGAAGCATTCTCTACGGCATGACGCCAAGAT
CCTTGAAGTAATCATGCTCCAGGGCAGCTCTTGCGTTGATTCTTTTGCTTGGATCCATCAACAGCATTTTAGAAAGGAGATCTATGCCATTAGG
ATCAAGGTTTGGGACAAAAGATTCCAAGTCCGTTGGTTTCCATTTTGGGAAAGCAGATTTATAATCCGGAAGCGAAGTTACCCCTGGCCATGTA
TCCTCAGTTGGAGTTCCCATGATTCTGAATATCTTGAAGAGTTGATCAATCTCGGAGTCTCCAGGAAACAAGGGCTTTTGGGTTATCATCTCCG
CAAATATGCATCCCACAGACCAAATATCAACCGGTGTAGAGTAGTGATGAGACCCTAGGAGTATCTCTGGTGCTCGGTACCAGAGAGTAACCAC
CTCATGAGTAAATGTCCTGACAGGGATACCGAATGCTCTGGCCAGTCCAAAATCTGCAAGCTTAAGTGAGTTGGTGCGGCGATCAATCAACAGA
TTCTGTGGCTTGAGGTCACGGTGGAGAACCCTGTGAGAGTGGCAATACGCTATTCCACGGAGAATCTGGTAAACATACCTTTTGATCATATGAA
GATCCTTGGAGAAATCAGGAGAAGAGTCCATGTGCTTTTTGAGATCCAAGTCAAGATACTCGAAAACCAGATACAAACGCTTCTCGCTGTGCAC
TACATCCTGCAACTTGACAATGTTGCTGTGCTGCATTTCTTTCAAAAGAGAGATTTCTCTAATGGCAGTGCTGGGGACACCTTCATCCTCCTGC
TCGAGGCGGATCTTCTTCAAAGCGATAGTCTCGTTGGTGACTTTGTCTCGTGCCTTGTACACAACACCGTAAGTTCCTTCACCGATCTTCTCAA
CTTTCTCGTACTGATCCATCCCTTTAAACTAGGCTGAAAGCAACACGAATCACGGGGACGATCGGATGTAGTGATAGCGAGTGAGACAGCCGAC
GGATCCTCACTCTCTGGATAAAAAGGCAGAATATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGGAAGGATGGGTGG
AGGAATGGAGACGAACAAGAACAAGTTCATAGAGGATTGGGGATCCGCGAGGGAGAATCTGGAGCATAACTTCCGATGGACACGTCGCAACTTC
GCTCTCATCGGCATCTTCGGCATCGCCCTCCCCATCCTCGTCTACAAGGGCATCGTCAAAGACTTCCATATGCAAGACGAAGATGCTGGCAGAC
CACATAGAAAGTTCCTCTGAGGTTTCTTTGCAAGCAACTACACTCTCTTCTTCATAAAGTCTCAGCAGTGTGAAATTTTCAAGAAGCTGATTGC
TACAACTCTCCTCTCCTTTTTTTTTTTTTGCATTGTATTCAGAATAAAAGAATAACATCTCAATGATTATAACTTCTGTTTTGTAAAAGTTTGT
TTTTAGTTTTGACATATTACTTTTGAGCTCAAGTTTAGCATCTTGCAGGATTTTAACATTTTGTAAGTGGGTGACAACTTTTGAGCCACACCAA
AGGAAAAA |
Primers for UN09778 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GCTGAAAGCAACACGAATCA |
59.995 |
20 |
TCCATCGGAAGTTATGCTCC |
60.036 |
20 |
236 |
1161 |
1396 |
| 2 |
TGACTTTGTCTCGTGCCTTG |
60.025 |
20 |
TTGTTCGTCTCCATTCCTCC |
60.05 |
20 |
263 |
1072 |
1334 |
| 3 |
TGCCTTGTACACAACACCGT |
60.072 |
20 |
TTGTTCGTCTCCATTCCTCC |
60.05 |
20 |
250 |
1085 |
1334 |
|
|
