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Simple sequence repeat (SSR)
>UN09784
TTTTTATAAAAAGATCCAAAAGGACCACCCAAAAAGAAAATAAGTTTTCAAGACCAATAATTTACCACTGGGGATTAACGGCTCCCCGAAGCGT
TGAGAGAGAGAGAGAGAATTCAAACGTCGGCAGCGATGGCGAGCACCAAAGTTCAGAGGATTATGACCCAACCTATCAACTTGATTTTTAGGTT
TCTTCAAAGTAAAGCTAGGATCCAGATTTGGCTTTTTGAGCAGAAAGATCTCAGGATTGAAGGAAGGATTACTGGTTTTGACGAGTACATGAAC
CTAGTGTTGGATGAAGCTGAAGAAGTTAGCATCAAGAAGAACACCAGGAAACCACTTGGAAGGATTCTGCTTAAAGGAGACAACATCACTCTGA
TGATGAACACGGGAAAGTAATGTCTGTTCTCAACACTCTCTCGAGGATTAGTGGATCTGCGTTTCGACTATCTCCAAAGCTTTTGCTAAATATA
TGTTGAGTTAAGTTCTTCTTCAGTTGACTGATAATACCTTCTCTTCATGATCGTGTAATATTGCAATGTAGTGACAAGTTTGAGAAATTATGGA
ACTTGGTGGTTGAATCTTATTAGTAACACTGTTTTTCTTTTGTTTGGAGTATTGTATTACAAAAGAGTCGAATTGTTTCACAATTTATTAAAAA
TCGATATTTGCTGC |
Primers for UN09784 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TTACCACTGGGGATTAACGG |
59.679 |
20 |
CCAAGTGGTTTCCTGGTGTT |
59.861 |
20 |
280 |
62 |
341 |
2 |
AAGATCCAAAAGGACCACCC |
60.169 |
20 |
CCTCTGAACTTTGGTGCTCG |
60.964 |
20 |
143 |
11 |
153 |
3 |
AAGATCCAAAAGGACCACCC |
60.169 |
20 |
CTCTGAACTTTGGTGCTCGC |
61.116 |
20 |
142 |
11 |
152 |
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