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Simple sequence repeat (SSR)
>UN09814
GGATATCCAACCAAGAAAAAAGTATGAAGATCTCTTCTCAAACTCTAGTTTTCGTGACTATAGCACTTGTCCTAGCTTTTGCAGTTCCTCTGAA
AGCCCAAGACAGGCAACAAGATTACCTCGATGTGCACAACCGTGCTCGTGCCGCTGTTGGTGTGGCTCCGATAAGATGGCATGCGGATGTGGCG
GAATACGCCCGACGATATGCTCTGCAAAGGCGAGGGGACTGTCGTCTAACTCACTCAGGCGGGCGTTACGGCGAAAACTTGGCAGGAAGCAGTC
GTGATCTGTCTGGAGCTGACGCAGTGAGGTTGTGGGTCAACGAGAAGAACGACTACTTCTACAATTCGAACACTTGTCGTTCCGGAAAAGCATG
TGGTCACTATACTCAAGTTGTGTGGAGAAGCTCGGTGTGGGTTGGATGTGCCAAAGTCAGGTGTAATAGTGGTGGAACTTTCATCGTTTGCAGC
TATGATCCTCCTGGTAATATTAGGGGCCGTAGGCCTTACTAAGAATATATATATATGTACGCAAATAAATAAAACATGTCCATAGAGGACGTAC
GTGTGTGTGTTGTTTTTATCTTTCAAATAATGATTATCATCTACCACTACTAGGATATGGTGATTCGATAACGTTCGTGTGTATGGTTGCATAA
TATTTTGTGATGGGATAATACATTGATAAATAGTTGTTTGTACGTACAATTAC |
Primers for UN09814 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GTTGTGTGGAGAAGCTCGGT |
60.307 |
20 |
CGAACGTTATCGAATCACCA |
59.542 |
20 |
249 |
393 |
641 |
2 |
AGTTGTGTGGAGAAGCTCGG |
60.444 |
20 |
CGAACGTTATCGAATCACCA |
59.542 |
20 |
250 |
392 |
641 |
3 |
CCTGGTAATATTAGGGGCCG |
60.519 |
20 |
CGAACGTTATCGAATCACCA |
59.542 |
20 |
162 |
480 |
641 |
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