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Simple sequence repeat (SSR)
>UN09825
TTTTTTTTGAAGAAAACAAAGGATCAATTATTCAATCGGAAACCATCTTGTCATATGTACTGATCATAAAAAAAGAAAGCTTCACAAAAATGTC
AACTGGTCCAGAAAACAAGAAGGCAGAGAAATAAACTGATTCCATTATCCTAAAACCCCACCCAAGCATAAACTTGTTAGTTACACAACCACCC
AAGCATCACTGTCGGATCCTGCATCTTCATTGCCGGATCCTGCATCTTCGAGGTCCAACTCTTCAACACCTTTTGCGAGTTCCATCATTTGAAT
CGCGCCTGCTCTCTCAGTTTTAGGAGTTTCAACATCGTCGACAACCACGTATTCTTCATCAGTCAGCGAACCCGCAGATGCAGTTTCGGATAAA
TCGACTTTCTCCAGAGAGGTTCTAACAGCCTTGACAGATGATTCTTCGTCATCACTCTCAGAGTCGAACCCATCCTCGAGAGATGAATAGGCAA
TGAAATCGTTGTAGAGTGCGTAGGTGTCGTAAACGGGCTGTCTCTTACAGGGTCGGATCAAATACGGTAAAGGAATCCTCCTCTTGCGAGATTC
CATGGATTTGAACGAAGTTGCATGAACTGGTGCCAATGTTGCCATGATCTTGGACGATTAAGGGGATATCGATAATCAAGAAACTTCTTCAAAT
CAGGGAAGAAGAAGAAGAAGAAGAAGAGATTAGCGTTGATGTAAACAAATCCC |
Primers for UN09825 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TCGTAAACGGGCTGTCTCTT |
59.875 |
20 |
GGGATTTGTTTACATCAACGC |
59.333 |
21 |
215 |
497 |
711 |
2 |
GCTGTCTCTTACAGGGTCGG |
59.867 |
20 |
GGGATTTGTTTACATCAACGC |
59.333 |
21 |
205 |
507 |
711 |
3 |
GGCTGTCTCTTACAGGGTCG |
59.867 |
20 |
GGGATTTGTTTACATCAACGC |
59.333 |
21 |
206 |
506 |
711 |
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