 |
Simple sequence repeat (SSR)
>UN00011
GGGAGAGAGATAGAAAATGTCAGTGCCACTCAAATTAACGTCTTCCATGTCATCTACTCAATCTCCATCTTCATTTTCACAAACATCAAGCTCT
GTGAAACTCAAGTCCCTGGTTCAAACTCTCATCATCTCTCAAGTTTGTCGACTAATCCGCAAAATCTACAGAGCTTCGTCCATTCTTGTTAGAG
TCTTGAGGAAGAAGCAATACAGTCTCTTGGCAATGCCTTCTTCGTTCTACCCAAAAAGAGCCTCAAAGAAACAAAAGAGTAATATATTCTTCGG
CTCCTTCAGACTTCACTACAACTTTTGCTCTTCTCACGTGGTGCCTGTCTCTGCGCCGGTACGTCTCCCTGAGTAACTCTACTTGGCACATCTC
CAACACGACTCTACTTGGGAGTCAATAATGCATTCGACTGAGTCGATGGATGATGATGATGATATTCAAGAACCATCTCAGCTCTTTAGCTATC
TAAAACAGCTAGAGGACGATAAAGTGATTAACACAAAAGAAGAAAAAGAAGAAGGGAAAGAGATGAAGATGATGAATGAGATCGATAAATTGGC
TGATATGTTTATAGCATATAGTCATGAGAAATTCATGTTGGAGAAGGTTGATTCGTATAGGAGATTCCAAGAAACGCTGAATACTAGCAGTTGA
TTGATGATTATGAATGGACCCCTTTGCATCTTTCATTTCTTTTTATGTAATTTCACTTTTCCTTCTTTTTTCTTTTGAATTCCTTCCTGGTGTT
CTAATTATCTGGAAATGT |
Primers for UN00011 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GCACATCTCCAACACGACTC |
59.266 |
20 |
CGAATCAACCTTCTCCAACA |
58.695 |
20 |
252 |
368 |
619 |
| 2 |
GCACATCTCCAACACGACTC |
59.266 |
20 |
ACGAATCAACCTTCTCCAACA |
59.583 |
21 |
253 |
368 |
620 |
| 3 |
GCACATCTCCAACACGACTC |
59.266 |
20 |
TTCAGCGTTTCTTGGAATCTC |
59.443 |
21 |
278 |
368 |
645 |
|
|
