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Simple sequence repeat (SSR)
>UN09910
TAGGTCGCACAACAAATAAGAGAGAAGGGTCGAGACGACGAAGAACAATCAAAATCAATCAATTCCATGGAAATCGAGGTCTCTAGCTCGACTC
CTGATTCAGTCGAGTTAGATAGCATCCGTGTCAAGCGTAAGACGTTGCAGAATCTGCTCGAGGATTGCCAGAGAGCTCTCGAGCTGCTCAATCT
CACCGATACTGCTCCCGATGGCTCCCAAGAGGATAATAACATCGACTCACCTGAGAGGGAAGAAGAAGAGTTTTCTTCTTCAGATCCTGAAGCC
GATAAATTGTATGATCTCATCAGATCTAGAGTCGAAGGTCATGACTTTCGGGAAAAGATTGAGTTAGCTCAAGTCTCTCTTCTCCATGATCTTC
CTGAAGATGGTAGCTCTTGGGACGTAGTTAGTGAAGATGATGTATGGGGGGTTGAGGGTCAAACGGAAGATGATTATGTTCTTGTTAGGGAAGA
AGATATTGCTGACGGTATCGCTTGTTTCATGGCTACTTATTTATCTTCCCTTAACCAGACTAAGGATATATCACCTGATCAGCTTCAGAAAGCA
CTTAGCACGATGTTTTCAGTGAAGAAGCGAAAAGGGAAGCTTCGTAAAGCATGGGAAGGAAGTAAAGTTATTTACAACGTTGCATCCTGGAGTG
CTACTGCCATTGGGATATATCAAAACCCGATGATCCTGAGTATTGCATCCAAAGCCTTCTGGGTGTCTTGCAAGGCCATATCAAAGCTTGTTTG
AAACACCTGAATTGGGAACACACATCTCACTGCTCATAAGTTACAACTTTCTCAACTCAGCAAATGTTTTATATCATCATTCTTATTTATCTGT
ACATATTCCATTTGTTGCCTCTTTCTATGTGAATCTGTGATGTTATCGTCAACGCAATGTTAAAGATTAGTTTGATCTCAATCTTCTTCATATC
ACCACATTGTTTGGTGTTGTTTAAATTGTTTGCCAGAGATTAAAATCAGACTTTATTCTCCATGAATTTAGTCAATTTTAGTAAAGAGAGCTTT
TGTATTTGAACTTCAACAGTCTTGTAACATATTGACACGCTACTGCTAAAAGGAATGTAGCAAGCAAATGAGATATGATCCATTACAGTTTCCA
GCTAAGGAATCTTAAGCAATTTTTTAGCCGTTTGATATTTTGTAGTCGAAAGACTTGCCTTCATTAACTTGTAGTGTCCCTGCAAAGAATGGAG
CGAATCTCCATAATCGATCTCGGAGGCTGCAAGTCCTGCTCTCTCAACGAATCTCCTAGTAGCTTTTGCATCTCTGCTGCAAATGCATCGTCTA
ACATCTGCAAATATGCACCAATTTACGTAAAGATGAGGTAAAAGTCTTTTGGTCAATGCAATCAAAAGTATAGGGGCCGGCCTTACAGTGACAG
CAACTCTAGAACCCGTGTATCTGTTCTTTTTCCTCTTCTCCAAAAAGCTTAGAACAATCTGTCAATAGGGGCAAGAGAAGAAGAGATCAGCTCT
CCCCAACACACACACACAAAAAAAAACTCAGGAGACACTATTGAAACTAGTTACCTCTCCCATACGGTCCCAGTATCCTCTGGACAATGCGATG
AATACATCCGTCCCCCCACAAACGGAATGTAGATGATTCACCGTGTTGGTGAGCTGCTCCTTCAGGGTTTGCATTTTTATTCCCATGTCTTTTT
TTCCAACACTTTTTTTACACTCCTGAAGAATCTTCTTCAACGTTGTCTCCTTTTGTAGCTTGCTCTGAAGAAAAAAAAAGAATAGCCGATTACA
ACATAGACATTTTACTAAATGGGATTCAACAAGATTGCAAAAAAAAAAACATGGAACTCACATTTTTTACGAGTTTTTCGACTACAGCTTCAAG
GTAACTTCGAAACCTGGCTCTGAGCAACACCGTCACCTCAGAGAGACGATCGCAAAGAGCTGCGTTCTCACCATCAGGAATGCACGAAGACCAT
GCTCTAAATTGAGCCTCTATATCAGGCCGTAGAACATCAACCATTCTCTTCATAGAGTTTAGTAGAATCCCCAGCTGCATGCACCAGCAGATAT
ATAAAAAGAAACTTTTCAGC |
Primers for UN09910 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GCTGCAAATGCATCGTCTAA |
59.983 |
20 |
GGGACCGTATGGGAGAGGTA |
61.095 |
20 |
278 |
1298 |
1575 |
| 2 |
GCTGCAAATGCATCGTCTAA |
59.983 |
20 |
GGACCGTATGGGAGAGGTAA |
58.861 |
20 |
277 |
1298 |
1574 |
| 3 |
TCTGTCAATAGGGGCAAGAGA |
59.822 |
21 |
CGGATGTATTCATCGCATTG |
59.914 |
20 |
141 |
1468 |
1608 |
|
|
