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Simple sequence repeat (SSR)
>UN09911
GGAAATTTGGACCGGATTTGCACTTCTCCGCCGCCTTCCCCCCCTTGATCTCTGTTTTGCGATCGCGACTAGTTGTATGCATGTAATAGCTTCG
ATCTCTAATTCCGATTCTGCTTTCGAACTCTCTTCTTCTCTCTCTCTCTCTCTCTGAGACGCCAAGCAAAGTCATTTTCTTTGTGGATATACAA
AGATGACAACAATCGAAACAGGTCCAAAAACTCAAAAGCCATCATCTCCTTCCACTACTCTCAAGCAACCATCTTCCTCTTCATCGTTTAAAAG
GTGGGGAAGGAGACACCCTTTTGTTAGATACGGACTTCCCATGATCTCTCTCACTGTTTTTGGAGCCCTTGGACTCAGCCAACTCCTCCAAGGC
AGTAAGGACATTGCAAAGGTGAAAGACGACCAGGAATGGGAGATTATCGAGACGAGAAAGGCTCTTTCTAGAACTGGACCTGTCGATGCTTACA
AACCTAAAAACACTTCCATCGAAGACGAGCTCAAGGCTATGCAAGGGAAGGTGGACATAAACTCGTACGAATACAAGAAAATCCCAAAGCTAAA
CGAAGGCAAGTCGAGTTGAGTTGAAGTCTTTTCTTAGATGTGTTTCTGTTTTAGCTTTTTTAAAGAACTCTTTACATAAACTGTATTAGTTTTG
GCCTTTCTAAACCATTAACAGATATGGGTTGATAATAATACTTGTGTTCATCTACAATATCTAAATAACTATTAGTTCTCTGTA |
Primers for UN09911 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCCGATTCTGCTTTCGAACT |
59.955 |
20 |
GGGCTCCAAAAACAGTGAGA |
60.232 |
20 |
247 |
104 |
350 |
| 2 |
TCCGATTCTGCTTTCGAACT |
59.955 |
20 |
AAGGGCTCCAAAAACAGTGA |
59.711 |
20 |
249 |
104 |
352 |
| 3 |
TCCGATTCTGCTTTCGAACT |
59.955 |
20 |
GTGTCTCCTTCCCCACCTTT |
60.349 |
20 |
195 |
104 |
298 |
|
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