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Simple sequence repeat (SSR)
>UN00964
CAGTTGAGAAATGGTTTATGACAATGCAATCTTACAATATTATTGTTTGCACATGATCACAAAAAAAGAGAGGACATTAACCAATCCACAGTAA
CACAAAAGGCAAAAAAAAAAAAAGAGAGAGAGAGACAAACAACATTAGAAACACAGCAACTTAACAAGGAGGAAACTCAAAACTTGTAGACACA
AGTTCCATCGTCACTTCTAGCTGTTGGATCAAAGTTTTCGGCTTGAGGATCAGTACACCCTTCTGGAACAGGAACGTTCACTTGCTGTGCTGCT
TTCCCATAGAAAGTTCCGCGGCCAATGGCGTCAGCGTTTGCGTCTCCCAACGCAGCCTCGTTAAGGTATTGGTCAGCAAGTTGGACTCTCTTGA
CGTTCTCTTGCTCCATCACAAGCATGTTTCCATACTCCATAAGCTTCTCAAGAGTCATCTTCGGTTGCTCGAACACCGGAGGAGCTTCCCTTGA
GTTCACCAGCCTCTTGCTTATCTTCTCCACTCCAAGTCCCTCAACGAACTTCCCATAGGAGCTTGGAAGACAGAGTCTACCATACCTTTGCCTC
TGGTGATGTCTTGTTGATCATCAGACACGTCGTAGGCAAGTCCCCTCCATCTGTCACCATCGGTCTGTTTGTCTTCTTTCACAGCAACCACTTT
GAATGATCCGTTGCTCTTCTTGTTGTTGCTCTGTGTGAATCTCGATGCGGTTACAACTTTCTTTCCCAAGAAGGTCGTAGCTGGGACTGAAGCA
GCTCCTGCTCCTGACCCGTTCAAGCTCAACGGAGCTCTGTTGATGGCACCGATGGTGGAAACTGCGGTGGCCATTTCTCACGAGTGTGCGTCAC
ACAAGAAGCTGAGAGAGAGAGAGAGATTCTGATCGGAGAAGATGGATAGATGTTCC |
Primers for UN00964 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCCACAGTAACACAAAAGGCA |
59.23 |
21 |
CTGATCCTCAAGCCGAAAAC |
59.813 |
20 |
157 |
85 |
241 |
| 2 |
TCCACAGTAACACAAAAGGCA |
59.23 |
21 |
ACTGATCCTCAAGCCGAAAA |
59.813 |
20 |
158 |
85 |
242 |
| 3 |
TCCACAGTAACACAAAAGGCA |
59.23 |
21 |
TGATCCTCAAGCCGAAAACT |
59.813 |
20 |
156 |
85 |
240 |
|
|
