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Simple sequence repeat (SSR)
>UN09936
GGATGCCACGCGTCGTCTTTGTAGCTTTTGGGAGGAAAAAACGAGGGGAGCTCTACTCGTCGACGAAGTGAAGCAAAATCGGTTCCGCCACTTC
TCCTCTTCTCCTCCCTCCATGTCCTCCGCCATCGCGGCCGCTTCCTCTTTAGTCTCCGCCGACGAAAGTCTCCTCTCATCGAATCCTCTCTTGC
AGGATTTCGATTTCCCTCCGTTTGATTCCGTCGATGCTGAGCATGTTCGTCCCTGGATTCGTGCTCTGCTGCAGCGCCTCGAAGGTGAATTGGA
GCAGTTAGAGAAATCTGTGGAGCCATCATGGCCAAGACTGGTTGAAGCGTTAGAGAAGCTCGTTGATCGGTTAAGTGTTGTTTGGGGAGTGATC
AATCACCTTAAAGCTATCAAGGACACACCTGAGCTTCGTGCTGCTATTGAAGACGTTCAGCCGGAGAAAGTAAAGTTTCAGCTTAGGTTGGGGC
AAAGCAAGCCTATCTACAATGCCTTTAAAGCTATTCGTCAATCTCCTGATTGGTCATCGATCATGCTTGTGTTTCTTCTGGTAGAGGTGGAGGA
GCTTCTGTCAAGAAGCAATCTGCTTGTGAACTTCGTCTTCACAAAGGTATCTATATATATATACTAGGAGCGGCCCGCCCGAATCGAACAAACT
TTAGGACGGTTTCCGGGTGGTTGTGTTGTCGGAATAGAAAAAGTGACTTTTGTATCAATTATCAGTACCATATTTGATTTCTATAGAAGATCGC
TGGTTCATAAAACTGAAATGTGCAATATAATTGAATTAAATTGTTATCTAAGTAACTGACTG |
Primers for UN09936 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TGGTCATCGATCATGCTTGT |
60.08 |
20 |
CCGGAAACCGTCCTAAAGTT |
60.345 |
20 |
154 |
521 |
674 |
| 2 |
AGGACACACCTGAGCTTCGT |
59.907 |
20 |
CCGGAAACCGTCCTAAAGTT |
60.345 |
20 |
279 |
396 |
674 |
| 3 |
ACGTTCAGCCGGAGAAAGTA |
59.875 |
20 |
CCGGAAACCGTCCTAAAGTT |
60.345 |
20 |
246 |
429 |
674 |
|
|
