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Simple sequence repeat (SSR)
>UN00964
CAGTTGAGAAATGGTTTATGACAATGCAATCTTACAATATTATTGTTTGCACATGATCACAAAAAAAGAGAGGACATTAACCAATCCACAGTAA
CACAAAAGGCAAAAAAAAAAAAAGAGAGAGAGAGACAAACAACATTAGAAACACAGCAACTTAACAAGGAGGAAACTCAAAACTTGTAGACACA
AGTTCCATCGTCACTTCTAGCTGTTGGATCAAAGTTTTCGGCTTGAGGATCAGTACACCCTTCTGGAACAGGAACGTTCACTTGCTGTGCTGCT
TTCCCATAGAAAGTTCCGCGGCCAATGGCGTCAGCGTTTGCGTCTCCCAACGCAGCCTCGTTAAGGTATTGGTCAGCAAGTTGGACTCTCTTGA
CGTTCTCTTGCTCCATCACAAGCATGTTTCCATACTCCATAAGCTTCTCAAGAGTCATCTTCGGTTGCTCGAACACCGGAGGAGCTTCCCTTGA
GTTCACCAGCCTCTTGCTTATCTTCTCCACTCCAAGTCCCTCAACGAACTTCCCATAGGAGCTTGGAAGACAGAGTCTACCATACCTTTGCCTC
TGGTGATGTCTTGTTGATCATCAGACACGTCGTAGGCAAGTCCCCTCCATCTGTCACCATCGGTCTGTTTGTCTTCTTTCACAGCAACCACTTT
GAATGATCCGTTGCTCTTCTTGTTGTTGCTCTGTGTGAATCTCGATGCGGTTACAACTTTCTTTCCCAAGAAGGTCGTAGCTGGGACTGAAGCA
GCTCCTGCTCCTGACCCGTTCAAGCTCAACGGAGCTCTGTTGATGGCACCGATGGTGGAAACTGCGGTGGCCATTTCTCACGAGTGTGCGTCAC
ACAAGAAGCTGAGAGAGAGAGAGAGATTCTGATCGGAGAAGATGGATAGATGTTCC |
Primers for UN00964 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GTCGTAGCTGGGACTGAAGC |
60.02 |
20 |
GAACATCTATCCATCTTCTCCGA |
59.568 |
23 |
170 |
732 |
901 |
2 |
AGGTCGTAGCTGGGACTGAA |
59.867 |
20 |
GAACATCTATCCATCTTCTCCGA |
59.568 |
23 |
172 |
730 |
901 |
3 |
AAGGTCGTAGCTGGGACTGA |
59.867 |
20 |
GAACATCTATCCATCTTCTCCGA |
59.568 |
23 |
173 |
729 |
901 |
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