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Simple sequence repeat (SSR)
>UN09988
TAAAACCAAGTAAATTCAAAAGATTGAACATACATGAATCGGGGAAGACACTGTTTTTTTGGATAATTTGCACACAAGGATAAACTTCAGATGA
TCAATCGAACATCATCATCATCATCACCATCCACATAGACCAATTTTTTATCACAAATTTAGAAAAAAAGCTTGAGAACGACAATGGAGTACCC
CCAGATACATACTTTAGTATTAGAAGGGGCAAAGATTTTCACTACTAGAAGCAAGTGCCTTCTGGAGGTTGAACAAGCTTACGGTTATGCGACG
TAGACATCTCCTTCTTCAGCTGTGTCAGTATTGTCTCCATTGTGTAGTCCCTTTGCCAGTTCGCAAGAAGCCCAAACTTCTTAGGTTCCACCAC
TCCTGTTTCATTGTTGACGCAAGCCATGTTGATACGTGAATGGAAACGGACAGTGGGAGGTTTTTCCGGGTAATCTTTGTCACAGAAGAGCTTC
AACTGATAGATCCTACCTTCATGAACAGTGTTATGAGGAGCGATGATAGTGCCAGTCCAAGAGCGCATGTAAATGTCATCTCCATCATCCATTC
CATAGCTCACAGTTCCATCTCCTATACCTTTCTCCCCACGTTCAAGCTCCTCTAGCAACCGGAAATTCCTCGGAACAACAACACTCGATCCTCC
AGAGCCAAGAGTCATGTTGTGGATTCGATCCGATTTTAGTTTATGAGATCTGGTCGTGGCGAGAGAGACGAGAGATCCGCTGAAGGAGAATCTG
GTGAAAGGACCC |
Primers for UN09988 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CATGAATCGGGGAAGACACT |
59.927 |
20 |
TTCAACCTCCAGAAGGCACT |
59.844 |
20 |
229 |
33 |
261 |
| 2 |
ATGAATCGGGGAAGACACTG |
59.927 |
20 |
TTCAACCTCCAGAAGGCACT |
59.844 |
20 |
228 |
34 |
261 |
| 3 |
CATGAATCGGGGAAGACACT |
59.927 |
20 |
TTGTTCAACCTCCAGAAGGC |
60.232 |
20 |
232 |
33 |
264 |
|
|
