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Simple sequence repeat (SSR)
>UN09994
GGACACTTTCTTTCTTCAAACTCCATAACAAAACAAAAAAAAAAACAGAGAGATCCATAATGTGCGACTCAGCTTCTCTTTCTCGTTGTTCCTC
ATACGAGACAGACTCTGAGATCTTCACCAGCTCCAGCTCATGCTCCTCCTACAGTGAATCTGAAGAAGAGTTCGAGAATGCTTTTGGTGGTGAG
TCGCTGCAAGAAACCAAGAAGTTGGAGAAGAAGAAGAAGAGCAGTGTGTTGCTTGAAGGTTACGTTGTTGATGATTTGAAGAGGACAAAGAGTT
TAACGGACGATGATCTCGAGGAGCTTAAAGGTTGTGTAGATCTCGGCTTTGGTTTCAACTACGAGGAGATTCCTGAGCTTTGTAATACTTTGCC
TGCTCTTGAGCTTTGTTACTCGATGAGTCACAAGTTTATGGATCAAGATCATCACCACCACCATACTTCTTCCCCTGAGAAGATTGAATCTCCT
ATAGCTAGCTGGAAGATCTCTAGTCCTGGGGACAGTCCTGATGATGTCAAAGCAAGGTTGAAGTTTTGGGCACAAGCTGTGGCATGCACCGTAA
GATTATGCACTTGAGATTTGGATTTTGAAGCATTCAAATGGGTGAGAGAAAGAAGACGATGAAACAACATAATTGCTGCATGCAGGAATGATGT
CTCTTTATATTAGGCTGTTCTCTTTCAGCTTTTTATTTTTGAGACTGACCTGCTTGAAAGAAACACCCATTTGTTGTTGTATGAGCTATGTTCA
GGGATGTATAAAAAAGCTTAGAGATTTTGCTAGGAAAATGTCTTGTAATGCTTTTTTTTAATAATAAAGATTTAATTCTTATTAC |
Primers for UN09994 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CCAGCTCATGCTCCTCCTAC |
59.973 |
20 |
AAGCTCAAGAGCAGGCAAAG |
59.898 |
20 |
263 |
127 |
389 |
| 2 |
CCAGCTCATGCTCCTCCTAC |
59.973 |
20 |
AGTTGAAACCAAAGCCGAGA |
59.853 |
20 |
216 |
127 |
342 |
| 3 |
CCAGCTCATGCTCCTCCTAC |
59.973 |
20 |
AACAAAGCTCAAGAGCAGGC |
59.763 |
20 |
267 |
127 |
393 |
|
|
