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Simple sequence repeat (SSR)
>UN09999
TTTTTGGAAATATACAACGTTTTTATTAATCGAGATTGGCCATGTATGGTCCATGAACAAAAGTTCAACAGATACTAGGATATATACACATCAT
ATTAGATTTTGTATCCGTTTTTTTTAACACATGCATATATGTGAAACTAAGAACCATGGATGAAAAAAGAAACACACACACACACGATATATAT
AGTTTAACAAAGTTTTATAGTCTGATCAGTTGCCAGATCCGGGTTGACAGTTCTCCGAGCGTGTGCACCTGGGTGGTGAGCCGTAGATGGATTG
GCAGTATACGGTAGTAGTGCACGTAAAATGATAACAGTTGGAGAAGTACGAGAAGCATGGCTGACAGAGAGAAGACAGGTATCCTCCTGGAAGA
TGACCATGATTAGTACGATAAGTGGTTGCCATGTTTTGAAAAGCTTTCCCGCCCCCGCAATGCATTGATCTGCTTGGTGGAAACCACATCTTGG
AGCTTCTTTGGTTATCGCCTTCCAAATTCCTCGCATTGATCGTCTCTTTAAGTTTACGGATCTCAGTCTGAGCACCAAATGCGTGATCCATATG
AAGCAACAACACCAGGAGAAGAAGAAATAGCACTGAAGAAACTATAGAGGACAACATCTTTAAATAACTCACAAGTATCTCTTGTACTGATATA
ATCACTCC |
Primers for UN09999 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TTAATCGAGATTGGCCATGTA |
58.122 |
21 |
ATCCATCTACGGCTCACCAC |
59.957 |
20 |
255 |
26 |
280 |
2 |
TTAATCGAGATTGGCCATGTA |
58.122 |
21 |
ACGCTCGGAGAACTGTCAAC |
60.453 |
20 |
225 |
26 |
250 |
3 |
TTAATCGAGATTGGCCATGTA |
58.122 |
21 |
AATCCATCTACGGCTCACCA |
60.483 |
20 |
256 |
26 |
281 |
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