 |
Simple sequence repeat (SSR)
>UN10033
GGAACCCTTTTACAGACTAAAATCGATCTTTGTAAGAAAATATCTTACGAATCTCTCTCTCTCGATCCCGTTTCACGTGTTTGTATTCGAATGG
CGAGTAACGGAGTTAACGACACGGTTACGGTGGCGAATGGCGCAGGGATTGAAATCCCTAAGAAAATCGTAGACCTCAACATTGCGGAGCCGGA
TGAGATTCTCGACGGAGAAGTGAAGGGACTATCTGATGTTTCTGGTGAGAAGAAGGACGAATCCGACACTAAGGCTGTTGGATCTACGGCTGCG
GCTGGGGATGATGTATCTCCTCGGGTGGATGATGATGTTGAGAAGAAGATTCGACGTGCTGAGAGGTTTGGTGTTTCGGTTAAGCTAACCGAAG
AGGAGAAGCGCAATTCTCGTGCCGAGAGGTTCGGTACTGTAGCAGCAGCGGTGGAGGACTCACAGGGAACGAAGAAAGGAGAGGAATTGATGAA
GCGAAAGGCTAGAGCTGACAGATTTGGTGTTCCTGCATCATCATCATCAACCACTACTAAAGTTGATAAGACTGAGGAAGAGGCGAAGAGGAAA
GCTAGGCTCGCTCGTTTTGGGAAGGATACCACTAAAGTTGATTCTGCTGAGGAAGATAAACGCAAAGCTAGAGCGCTCAGGTTTTCGAAACCTG
CTTCTGAGTCATCTTCAGGTTTACCTGGCAAGGAGGCAGTTGTTTCAGGAAACGCTGTCTAACGTTCCTGAATGAAGTTTCTTTTTTTTAGTTA
GGTAGGCGTTATGTAATTCCCTCTCTGGCTGCTTGATTGGTTCTCCCTTTATTTCTGCAATTTGAAGTCCCCCGTGTGTAGTATCTTAATTAAA
GTTGCAAGTTTGGTCGTGGTGGAGCAATGATTCTCTCAGATGGTTGGAAGCTAAGCAAGTTGTCACCGGATGAGACCATGAGAAATCAACAAGT
AACCTGTAGTTCTGATTGTCTTAAAAAGGCAATTATCAATGTGTTAGGACTTTGGTCCTAGGAATTCTGAAGTGGTTGGTGTTGACTTTTTTCC
ATGTTGCAGGTGCTTGAAGTGGTAAGTGTAGACTAAACGCATGTTCGTACCAAGCTTGTTAGAAACTAGTAGTGTTGATTGCTTTTGAGTTGTT
GTGCCAATGCGTTTTTCTTGAAAAACCAGCCTTAAGTTGCTAGCTTATCTATCAAACTAAGTGTTTTTCTCATACTGAGTTGTGTGCTTGTTTT
GCGAATATCGCGTGCAAAATAGATCCCATTACCTTGTGTTCGTTGTTGGTTTTGCTTATTAATATATAATATGACCTGTCAAGCCACCACTTCA
GAGTTCCTTTGTCATGTAAGACATATCATTAGAACACTAGAGGGTACTTGTTGGTTTCCATATCTCTGGTCCCTATGACAGTTGAAGAGAAGAG
AGCCTCAGACGCCGAAGAATCTCTGTTCGTGGGACTTGTACTTTGCGTGCTTTTTGATGGCTACACAATTTTTTATGCGTCCGTAATAGTTTTT
AGATAAAACTTTGTTCATACATTTTGAATCAAGCAGCCAGAAATACTTTTATGAAAGGGAATGTAATGTTTAGAGTTGTTTCTTATTTTCAACT
ATTGTGCTTGTGCCTAAACGCTTATATGCTGCAAGGTAATCTAAAAATTAAATTTTACTAGC |
Primers for UN10033 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GGAACCCTTTTACAGACTAAAATCG |
60.572 |
25 |
CGCAATGTTGAGGTCTACGA |
59.864 |
20 |
180 |
1 |
180 |
| 2 |
GGAACCCTTTTACAGACTAAAATCG |
60.572 |
25 |
TGTCGGATTCGTCCTTCTTC |
60.195 |
20 |
256 |
1 |
256 |
| 3 |
GGAACCCTTTTACAGACTAAAATCG |
60.572 |
25 |
CGTTAACTCCGTTACTCGCC |
59.769 |
20 |
112 |
1 |
112 |
|
|
