 |
Simple sequence repeat (SSR)
>UN10046
GGACAAGACATAAAAACAAGAACAAAGCCCCCTTATTGACTCACCATACTTCTTAGAATCAGGAAAAGTGAAGAAGCGAAAGAGAGAAGAAGAA
GAAAGTCGGATGGGAGTGGATTACTACAACGTCCTTCAAGTCGATCGCAACGCCTCAGACGATGATCTTAAGAAAGCTTACAGAAAACTCGCCA
TGAAATGGCATCCCGACAAGAACCCCAACAACAAAAAGGACGCGGAAGCCAAGTTCAAGCAGATCTCCGAAGCCTACGAGGTTCTTAGTGATCC
CCAGAAGAAGGCTGTGTACGATCAGTATGGCGAGGAAGGCTTGAAAGGGAACGTCCCTCCTCCAGATGCTGGTGGAGCCACTTACTTCTCTACC
GGAGACGGTCCAACTTCCTTCCGGTTCAACCCGAGAAGCGCAGACGATGTATTTGCCGAGTTCTTTGGGTTCTCCGGGCCGTTTGGTGGTGGTG
GTGGTACAAGATTCTCTAGCAGCATGTTTGGAGATAACATCTTTGCCTCTTTCGGTGAAGGAGGAGGAGGAGGAGGAGCTATGCATCATAGTGT
ACCCAGGAAGGCGGCTCCTATCGAAAACAAGCTGCCTTGTAGCCTTGAAGATCTCTACAAAGGAACCACCAAGAAGATGAAGATCTCGAGGGAG
ATTGCTGATGTCAGCGGGAAGACGATGCCGGTGGAAGAGATATTAACGATTGATGTGAAGCCAGGGTGGAAGAAAGGCACAAGAATCACATTCC
CTGAGAAAGGAAACGAGCAACCCGGTGTCACTCCAGCTGATTTAGTCTTCATCATCGACGAGAAGCCTCACCCGGTTTTCACTCGGGAGGGCAA
TGACCTCGTAGTTACACAGAAGATCTCGCTTGTTGAGGCCTTGACCGGCTGCACTGTGAACCTGACAACACTCGATGGTCGAAGACTGACAATC
CCAGTCACCAGTGTGATACACCCAGAGTACGAGGAAGTGGTTCCAAAGGAAGGAATGCCGTTGCAGAAAGATCAGACAAAGAGAGGAAACTTGA
GGATCAAGTTCAACATCAAGTTCCCAACGAGATTAACCTTAGAGCAGAAGACAGGAGTAAAGAAGCTTCTTGGATAAATTGAGCTGTTATCAGT
GAGTAACATACCAGTCAAAAGCAATGTAGAACAGAGGAAGAGAAAGATTTAAGCTTCTGTCATGTGTCGATCAGAGAGATTGTGATTATTACTG
TTGTATCCTTTTTGGTCGATCTGTAATAAAATACTCGTAATAAAATTTGTTTGTTGTAATCTAAATCACCATTCCTATAGATGCAAGAGTACTA
TTGTTTTTAATCACATCCTGATCCTGATGTACACAGAACAGTTGCAACACTGAACAGATCTCAGTCCAGAAAGGCTTGCGATCATCTCCCGCAA
CAAACTCTTGAACAACATTGTCCACTTCTATCAAGCTACAACCTGGCGTTCTCTTCATGTTCCCGTTCCTTATCACCTTCCTCAACCTCGAAAC
CTCCTCCCACTTCCCCAAATCTGCATAAATATTGGAAAGCAGAACATAGTTCCCCATATCCTCAGGCTCTAGCTCAACAAGATGGTCCATTGCG
AGCAGAGCAACATCGAGATTGCTTCGCGTTCTGCAAGAGCTCAACAACGACCCCCAAATCTTCGAGTCAGGTTTCATCGGCATCGTCTTTGTTA
CTTCAACAGCTCGTTCCAGTTCCCCTGCTCTTGCCAAAACATCGATCAGACAACCATAGTGTTCAATCTTGGGTTCGATCTGATAATCTTCCCT
CATCATATCAAAATACTTCAGACCTTGTTGCCACAACCCAACATGAGAACAAGCTGATAACAGGCCAAGAAACGTTATCCCGTTAGGCCTCACT
ATCGCTCTCCGCATTTCATTGAATGTTTCCATTGCTCCGTCAGCGTCCCGTGATGTGCATACCCCGAGATCATCGTACTCCACGATATAACATC
TTTCCCCTTCATCTGA |
Primers for UN10046 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TATTTGCCGAGTTCTTTGGG |
60.067 |
20 |
TCAAGGCTACAAGGCAGCTT |
60.154 |
20 |
187 |
426 |
612 |
| 2 |
TATTTGCCGAGTTCTTTGGG |
60.067 |
20 |
CTTCAAGGCTACAAGGCAGC |
60.154 |
20 |
189 |
426 |
614 |
| 3 |
TATTTGCCGAGTTCTTTGGG |
60.067 |
20 |
GGCAGCTTGTTTTCGATAGG |
59.845 |
20 |
175 |
426 |
600 |
|
|
