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Simple sequence repeat (SSR)
>UN10062
GGGCAGCCGCTCTATCTTTCTTCCATTGACGCACCTGACGCTCTGATCTCTGACGAACGCCATAGCTCTCTCCCTCGATCTCCGGCGAACTCCG
ACATCTCAAGCTCTCTCTCTCGATCTCCGGCGAACTCCGAGCTCTCTCTCTCTCTCTCTCGATCCATCTCGCTGAGCTCTCTCTCTCTCAATCT
CCGACATCTTAAGCTCTCTCTACTCCATACCCAGAACACCACAAGCTCTCTCTTCCATTCACATATCACCACCACGAGCTCTCTTCTCCCATAC
ATGAAGACTTCGAGCTCTCTCTCTCCCCCGATAGGCACTGACCTCGAGCTCCCTCTCGTTCTCTCGATCTCTTGAAGCTCATCTCATCTCACTC
TCTGATGCCACGTGCTATAACACTACCGGTGCGGTCCCTAAGTTACATCTCCCAAACGGCTGCTTAACTGGAACGATCAAAGCCAACAGTATCC
TCTTCGAGCTGCGTCATCTTCGTCACCTCAATCTCTCTCCATCTCCAACGCATCTCGAGCTCTTTATCTCTCTCAAGCTCTCCATCTCGGTCTC
AAGCTTCTCTCACTCAAGCTTCTCTCACTCAAGCTTCTCTCACTCAAGCTCACTTTGTTTCTGATTTGCAGAGCTTTGACATACATTCATGGAG
GAGTAGGAGTCTGCCACAGAGACATAAAACCACAGAATCTTCTGGTTAATCCTCATACACATCAGGTCAAGCTCTGCGACTTTGGTAGCGCTAA
AGTTCTGGTGAAGGGCGAACCAAACATCTCATACATCTGTTCCCGTTACTACCGAGCACCTGAGCTTATATTTGGAGCTACAGAATACACAACA
GCTATTGACATATGGTCTGCAGGGTGTGTTCTTGCTGAGTTGCTCCTTGGACAGCCTCTGTTTCCAGGTGAGAGTGGAGTCGACCAACTAGTAG
AGATCATTAAGGTTCTTGGAACACCAACTCGAGAGGAAATCAAATGTATGAATCCAAACTACACTGAATTCAAGTTCCCGCAAATTAAGGCTCA
CCCTTGGCACAAAATATTCCATAAGCGTACACCTCCAGAAGCTGTAGATCTAGCCTCAAGACTTCTCCAGTATTCTCCAAACCTCAGATCAACC
GCTATGGAGGCAATAGTTCACCCGTTCTTCGATGAGCTACGTGATCCCAATACACGTCTACCTAATGGTCGTCCCTTGCCTCCTCTCTTCAACT
TCAAACCTTAAGAGCTTAAAGGAGCAAGCGTAGAGCTGTTGTCCAAGCTTATACCTGAACACGCCCGAAAGCAGTGTTCCTTCCTCGCTGTCTG
AGTGACTAAACCTCTCTGTGTGTATGTATGTATGTATGCAATATGTACGCATGCGTATGCTTAAGTAATGGAGTTAGCCCGTACTCAAAGATTA
TTATTGTTAGCTTTTCATCTTCTATTAATGTAGCCTGTGTCGTTTATTGTCAGGGTCCCACGGATGATCAAACATTATTTATTTATCAAAAAAA
GCTATGTTCTCTACC |
Primers for UN10062 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AGCTCTCTCCCTCGATCTCC |
60.058 |
20 |
GCTCGTGGTGGTGATATGTG |
59.992 |
20 |
204 |
64 |
267 |
2 |
AGCTCTCTCCCTCGATCTCC |
60.058 |
20 |
GCTCGAGGTCAGTGCCTATC |
59.981 |
20 |
268 |
64 |
331 |
3 |
AGCTCTCTCCCTCGATCTCC |
60.058 |
20 |
GAGCTTGTGGTGTTCTGGGT |
60.159 |
20 |
173 |
64 |
236 |
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