 |
Simple sequence repeat (SSR)
>UN10112
GGAACCGGTGGCCAGTACAAGTACTACTTCAACATCGGTAGCGTCGACTCTTTCGAGGAGAAACTCGAAGAAGCTCAAGAAGCCTTAGGCATTG
ATCCTCACCAGTACGTTCCCGTCACGTACACAACTGAGATGGTCTGGTTCCAAGAGTTTCTGCGGTTCGCGCCGACCCTACTCCTCTTGGGCAC
TCTTGTCTACGGAGCCAGGAGGATGCAAGGCGGGTTAGGAGGTCTAGGAGGAACCGGAGGAAAGAACGGCCGTGGAATCTTTAACATAGGCAAA
GCCACGATAACGAGAGCTGACAAAAACTCCAAGGACAAGATTTATTTCAAGGACGTCGCTGGATGCGAGGAGGCTAAACAAGAGATCATGGAGT
TTGTTCATTTCCTCAAAAACCCTAAAAAATACGAAGACTTGGGCGCTAAGATACCGAAAGGAGCGCTTTTAGTCGGTCCTCCCGGAACAGGAAA
GAGCTTTTAGCCAAAGCAACAGCTGGAGAATCAGGCGTGCCGTTTCTCTCTATCTCCGGTTTAGACTTCATGGAGATGTTCGTCGGTGTTGGAC
CTTCGAGGGTGAGAAACTTGTTCCAAGAAGCTAGACAAGCTGCGCCGAGCATCATCTTTATAGACGAGATCGACGCCATCGGTAGAGCGAGAGG
ACGTGGAGGGTTAGGTGGTAACGACGAGCGTGAGAGCACTTTGAACCAGCTGCTTGTCGAGATGGATGGGTTTGGTACGACGGCTGGAGTTGTG
GTTCTCGCTGGGACCAACAGACCGGATATTCTTGATAAAGCTCTGTTACGTCCCGGCCGGTTCGATCGTCAGATAACCATCGATAAACCGGATA
TCAAGGGGCGTGATCAGATATTCCAGATATACTTGAAGAAGATCAAATTAGATCACGAGCCTTCTTACTACTCTCAGAGACTTGCTGCTCTCAC
TCCTGGTTTCGCTGGTGCTGACATTGCTTATGTATGTAACGAAGCGGCTCTTATCGCTGCTAGACACGAAGGAGCGACCGTCACGATGGCACAC
TTTGAATCTGCTATTGATCGTGTCATTGGTGGTCTTGAGAAGAAGAACAGAGTGATAAGTAAGCTGGAGCGTCGTACAGTTGCGTATCATGAAT
CTGGTCACGCGGTTGCTGGTTGGTTCCTGGAACACGCGGAGCCATTGCTGAAGGTGACCATCGTGCCACGTGGAACAGCTGCGCTTGGTTTTGC
TCAATACGTTCCTAATGAAAACCTTCTCATGACCAAAGAACAGCTCTTTGACATGACTTGCATGACTCTAGGTGGCCGTGCAGCCGAGCAGGTA
TTGATAGGAAAGATCTCAACGGGTGCACAAAACGATCTAGAGAAAGTTACAAAGATGACATGCGCGCAAGTAGCTGTCTACGGTTTCAGCGACA
AGGTCGGACTCCTCTCGTTTCCGCCGAGGGATGATGGATACGACTTCAACAAACCGTACAGCAACAAGACCGGCGCGATCATAGACGAGGAAGT
GAGGGAATGGGTGGGGAAAGCTTACGAGAAGACGGTGGAGCTGATAGAGACGCACAAGGAGAAAGTGGCTGAGATCGCCGAGCTTCTGCTGGAG
AAGGAAGTGCTGCATCAGGATGATCTTTTGAAAGTTTTGGGTGAGCGTCCGTTTAAACCGGCTGAGTGACTAACTATGGCCGGTTCAAGTCTGG
GTTTGAAGAGAGTGAGAAGAGAGTCCTCCACAACGAGTGGTGCACCTGTGGTTGATGAAGGAGCTCCACCGCCGCTTGAGCCGCAGTGGTTCCT
ACGTAGGAGAGTGAGTGAGTGAGTGAGTGAGTTCCACCTGTTACGATTGTAAATTTTTTTATTAAGAATGCAATAAAACACAACTAAAACAAAC
AAACAAACCAAAAAGTCTCTTGTTCTTCAATGTTTGGTTAGTGATGAATATTATTTTTGTTACG |
Primers for UN10112 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GAAAGTTTTGGGTGAGCGTC |
59.717 |
20 |
GAGACTTTTTGGTTTGTTTGTTTG |
59.159 |
24 |
272 |
1628 |
1899 |
| 2 |
GAAAGTTTTGGGTGAGCGTC |
59.717 |
20 |
CAAGAGACTTTTTGGTTTGTTTG |
58.029 |
23 |
275 |
1628 |
1902 |
| 3 |
CACCTGTGGTTGATGAAGGA |
59.52 |
20 |
AACCAAACATTGAAGAACAAGAGA |
59.218 |
24 |
185 |
1735 |
1919 |
|
|
