 |
Simple sequence repeat (SSR)
>UN10142
GCAAACATCATTGAATATGTATGAACATTGTACAATGAACTTATTAAGACTTTTACCTTCATTTGTGCAATTTCCAACTGAAGAAAAAAGGAAG
TAAAGAACACAAAACTTATTAGCCAAATGACAACCTCCTCTTTCAAAGACTTCTCGGAAGATCTTAGAGTTTGGATGTAGTCAATCACAAATTC
AGGTTCAGGAGATTTTCTAGCAGGTACAAAGGACTCTTTCTTAAATGCTGAGTTCCACTTATCAATCTCTGCTTTTGCTGATTCAAGCTCACTT
TGACATGAAGCAAGCTCATCTTTACAGCTCTGAAGACTGCCACAGAGAGAGACAAAGCAAGCAGGTTAAAGTGTATACATCAAAGCAAACACTC
TCTTTTTCATCCACTTTCGTGCAAGTGCAACACCTTTTTCATCCACTTTCGTGCAAGTGCAACAGCTGCAACACCTTCTCAGATTCAATAATCA
CAGAGAGAGCAAACAAAACGGTCTGTTTCCGTTTTGTCGAGGAGCCTCCGAGAGAGAGAGAATCGTAAGCATATACATTATGCACTTCTGATTT
GAGAACACGCCAAAAGCTTACAATACAATACATATATTGTAAGCTTATCTGCACTTATCTGAAAGTGAGCCACTCTCGCCTCATTCCCCCAAAC
ATATACATCAATTTAACTTTCATCTGGCTTCATTCATTGCTCCAACAATACATATATTATCTAAAATGTATTAAGACTGAGCTGATCTGTTCAT
GGTGGCAGAGATAGTATAACAGAAAGAAACGGTGGCGGAAATCGTTGGCGACCATTGGTGCGGCCTGTGGCTTGGCTTGAGAAACGGTGGCGAT
ATAGTCGAAATTGGGGACTTGTTTGCCGGCGGATTCGAACTGAGAGGTGAGCGGCGTCGGATTGATTTCGAGGAGAGACCATCGGGAGAGATCA
CGAGAGAGAGGAGTCGGCGTCGTCGAGGAAAAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGTCAGAGATCTTTTGAGAATGGCA
ACTTCAGGAGAATCATCCTCAGAGACGATGGAAGACTCACACTCACCGGCGGCGATTCCACAATCTCCGCCACCGGCTCCTCTCCTCACTTCGA
TTCCAAGCGCTAAGATCGCAACGACGACGGTTGAAAACGCAGCTTCCTGGATCGAGGACGCGATGCGTCAGGCGCTCGTGTACCAGAACACGAT
CCTGGAGACGCTGGATTCCAAAATCGACGCATCGAAGTCTCGATTGAGCCAAATTCGAGATACTTCAATCGCTCACACCAGCCAAACAATCGAT
TCTATTAGAGAGATTGCTTCTGAGTATAACGTATACGAGCATATGGTGTTTGCGAAGATCAAAGATGGTGTGAACGTTGCTGCATCTCATCCTC
TTATATCAGGAGGTTTAGCTTTTGGTGTTGGGATCTTTGCTTTGAAAAAGACGAGAAGATTTGTGTACTACAATGCTGTACGCATGTTTTCAAG
CGAAGAGGCGTTGCTTTCTAGAGCGGATCTTAGAGTAAAAGAGCTGAGACAATCGCTGGATCGTCTTACAGCCGAAAGTGAAAAGTTAGAGCGA
GTTGCAACTGTGGCAGAAGATGAGCTGATCAGAGGAAGGATGAAACTCAGACAAGCAGGCAAACAGATACGAGGTGTTGTTAACTCAGCTTATA
AGATTGAAAAGCAAGCAGCAGGTTTAAAAGATGTACTTAAAGAATTACCCACGAGAGAAGCTTCTCGGTTCCGTTCTCAAATATCGAACCGTGC
TTCTGAGGTAAAGCAAGAGAGAAAGGCTTTGACAAAGGAAGTGAACAAGATCAGCAACTATGGTATCTCCGTATGAGGAAAATCAAAACCCATT
TTTCTAGTTACGGATTTGAATACACTCTTGAGTTCTTAGATGATGGAGCAATATTATATACACTATTAATAATGTCTAAAACATGATTAAGACT
AATCTTTTTGTTTGGTTTCAAATGCGAAAGATGCAATCTCATGTTGTCTTTTGTTTTCGAGTGCTTTGGTTCTTTGGCAATTAGTTTAGCAATA
CAAATTGATGTTTGCAACCATTTGGTGCGTCT |
Primers for UN10142 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CGGGAGAGATCACGAGAGAG |
60.088 |
20 |
CGGTGAGTGTGAGTCTTCCA |
59.864 |
20 |
154 |
929 |
1082 |
| 2 |
CGGATTGATTTCGAGGAGAG |
59.767 |
20 |
CGGTGAGTGTGAGTCTTCCA |
59.864 |
20 |
179 |
904 |
1082 |
| 3 |
CGGGAGAGATCACGAGAGAG |
60.088 |
20 |
GCTTGGAATCGAAGTGAGGA |
60.34 |
20 |
208 |
929 |
1136 |
|
|
