Simple sequence repeat (SSR)
>UN10172
GGAAAACACATTAATATTTCAGAGCTAAAGATAATATACATTTTTAAAACTTAAAAGAGATATATAAAAAAGATGAACGCCGGAAAGAAAGCTT
CGTGGACGGTGGCGACTGTGATCGCAGTGGTGGAAGTGCTCAAGGACCAAGGCGTTGCTCGCTGGAACTACCCTCTCCGTTTACTCCACAAAAA
CGCAGTGGCTCACGTCCGTACCATCATTATCCCATCTCGCTCCTCTCCTCCTCCTCCTCCTGCGTCTTCTTCTTCGTCGGCTGATATAATCAGA
TCCAAGCAGCACAGGACCAAGTCCTTTGAGAAAGCTATGGGGCTTAGCTGCTTTGGTCCCACCACCGTTAGATTTTAAATCTTTTAATTCCTAT
TGTATTCTTGTATTCATGTTCCTATTCGAATGTGCGTCTCTATATGACTTTTTTAGCCACACAAGCATAACTAGGCCCACCACAGCTTCAACTT
GGAACCATTGTTAACATTCATAAGTTTCAAACAAATTATATCAATTTTGAAAGTAATTTGCCG |
Primers for UN10172 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CCCTCTCCGTTTACTCCACA |
60.103 |
20 |
GTGGGACCAAAGCAGCTAAG |
59.875 |
20 |
180 |
165 |
344 |
| 2 |
CCCTCTCCGTTTACTCCACA |
60.103 |
20 |
CAGCCGACGAAGAAGAAGAC |
60.134 |
20 |
107 |
165 |
271 |
| 3 |
GAAGTGCTCAAGGACCAAGG |
59.844 |
20 |
GTGGGACCAAAGCAGCTAAG |
59.875 |
20 |
218 |
127 |
344 |
|
|
