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Simple sequence repeat (SSR)
>UN10221
GGACGATCAAAAGCTCACATTGAGAGAGAGAGAAGTAGACAAGTCTCTCACATAAAAAAAAAAAAAAAAAAAACCCACCGGAGAAAAAAAAAAG
AGAAGAAGATGTCGTGGCAATCGTACGTTGATGACCACCTCATGTGCGACGTCGAAGGCAGCCAGCTCACCGCCGCCGCTATTCTCGGCCAAGA
CGGCAGCGTCTGGGCTCAGAGCGCCAATTTCCCTCAGTTGAAGAGTGAAGAAATCAAAGGAATCACAAAGGACTTCGAGGAGCCTGGGCATCTT
GCACCAACCGGACTCTTTCTGGGTGGAGCCAAGTACATGGTTATTCAAGGTGAGCCAGGAGCTGTGATCCGAGGCAAGAAGGGACCTGGAGGAG
TTACTATCAAGAAGACGAATCAAGCATTGGTCATTGGCATCTACGAGGAGCCCATGACTGGTGGTCAATGCAACTTGGTTGTGGAGAGGCTTGG
TGATTATCTCATCGAGTCTGATCTCTAAATTTTTCAGTTTCAAAAGTCTCTTCTTTCTTTATAACTAAAGAAATGTTCTTTTATCATTGTGATT
GAATCGTAATGCTATCAAAACGCAAATCAAATTTGAGGTTTGGAACCAATATCTTGTTGTTGGTCTTTGTTATTACCGGGTTTGTGTGTCTTAT
GTAATGGCATTTTGATCATCTCTTCATCCCTCCATATGTATTGTGTT |
Primers for UN10221 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GGACGATCAAAAGCTCACA |
57.288 |
19 |
CATCAACGTACGATTGCCAC |
59.995 |
20 |
127 |
1 |
127 |
2 |
GGACGATCAAAAGCTCACA |
57.288 |
19 |
TTCAACTGAGGGAAATTGGC |
60.051 |
20 |
230 |
1 |
230 |
3 |
GGACGATCAAAAGCTCACA |
57.288 |
19 |
GCACATGAGGTGGTCATCAA |
60.544 |
20 |
141 |
1 |
141 |
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