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Simple sequence repeat (SSR)
>UN10270
GGAAAATAAAAAAAAATCAAAAAAAAAAATCAAAAAGACAGAGAAAATACAGAGAAATCAAATCCCCAAATATGGAATTCAGACAGAGTCGCAA
CTAGATTTGTCATCTCTCTTTCCCCTCTTTCTCCTGTAAATCCAATCGGAGTTACGATCTTTTCCCCCCTCGCATCGTAACTCCTCACCAGAAA
AAACAAATCTGCTTCCCGATCTCGATCTTGATCCCGTTCTTCACGATTTAAACAAAAAAGGGAAGGGAGGAAGAATAGCAAGTTTTGATCTATT
GGGTTTCTAAAAATCTTTAGAAGTAAGTGAAGAAGCATTGAGAGAGGGGTTTATATATATAAATATATATATATATGTGAGTTATGGTATCAGA
GACTATATTGCGGATCGTAGCACCATGTTGGAGACGACCTTCTGTGAAGGGAGATCATTCAGCTAGAGGAGGAGATGTTAATGGGAGGTGTGAT
GGGCTTCTTTGGTATAAAGATTCTGGCAACCATGTTGCTGGAGAGTTTTCGATGTCTGTGATTCAAGCTAACAATCTTCTCGAAGATCATAGCA
AGCTTGAGTCTGGTCCCGTTAGTATGTTTGATTCGGGTCCTCAAGCTACTTTTGTCGGTGTTTATGATGGTCATGGTGGTCCTGAAGCTGCTCG
GTTTGTCAATAAACACCTCTTTGATAATATCAGAAAGTTTACGTCTGAGAATCATGGAATGTCTCCATCCGTCATAACGAAAGCGTTTTTAGCT
ACGGAGGAGGAGTTTCTTTCTCTTGTTCGGCGGCAGTGGCAGACAAAGCCGCAGATTGCTTCTGTTGGAGCATGTTGTCTGGTAGGGATCATAT
GTAGTGGATCTTTGTACATCGCCAACGCGGGTGACTCTCGGGTTGTGCTAGGAAGACTGGAGAAAGCTTATAAAATCGTCACGGCTGTTCAGTT
ATCTTCTGAGCACAACGCGAGTTATGAATCTGTGAGAGAGGAGTTGCGGTTGTTGCATCCTGATGATCCTCAGATTGTGGTCTTGAAGCACAAA
GTCTGGCGTGTCAAAGGTATTATACAGGTGTCAAGGTCCATTGGTGATGCATACTTAAAGAAAGCAGAGTTCAACAGGGAGTCGCTATTAGCAA
AGTTCAGGGTGCCTGAGACTTTTCATACGCCAATCCTAAGAGCAGAGCCTGCAATTACAGTACACAAAATCCACTCCGAGGATAAGTTTCTCAT
ATTTGCATCAGACGGCTTATGGGAGCACATGAGCAATCAGGAAGCTGTTGACATTGTGAACACTGGTCCTCGTAATGGGATTGCGAGGAAGCTC
ATAAAAACAGCTCTAAGAGAAGCAGCAAAGAAGAGAGAGATGAGATATTCAGATCTAAAGAAGATCGATAGAGGAGTGAGGAGACATTTTCATG
ATGATATAACGGTCATTGTTGTGTTTCTTGATTCACATCTCGTTAGTAGAAGTATCTTGCGCCGACCTCTCGTCTCCATCTCAGGCGGTGGTGA
CTTGGCTGGACCTTCTTCTACCCCTTGACTCACTCTCTTACCACAAATCTATAATATATATATTCTAATAATATTCAACATATCCACTATATAT
AAACACATTGCAGAAACACTTCCAAGTTCCTTCTCTTTTTTCCTTTATATATAACAAAAAAAAAACATTTTAACTCTGTTTTTTATTCATCGCA
AGAAAAAAAAAAGAATGAATTGAAACATCAATGTATAGGGCTGAGTTTATTATGATAAAAAGAGATATCATTTGTTGG |
Primers for UN10270 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CGATCTTGATCCCGTTCTTC |
59.629 |
20 |
ACCAAAGAAGCCCATCACAC |
59.973 |
20 |
273 |
211 |
483 |
2 |
TCGATCTTGATCCCGTTCTT |
59.629 |
20 |
ACCAAAGAAGCCCATCACAC |
59.973 |
20 |
274 |
210 |
483 |
3 |
CAAATCTGCTTCCCGATCTC |
59.773 |
20 |
TCCCTTCACAGAAGGTCGTC |
60.238 |
20 |
237 |
192 |
428 |
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