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Simple sequence repeat (SSR)
>UN10325
CGCCTCCGTCTCTAGTTTAATCGGTGTTGGGTTTTTTCTTCTTCATCTGATCAATAATGGCTTCAGATGCGGATATGGAGGACTACGGGTTCGA
GTACTCAGACGAGGAGCAGGAGGAGCAAGACGTCGACATCGAGAACCAGTATTACAACTCCAAAGGCAATGTCGAGACCGACCCCGAGGAGGCG
CTCTCCGGCTTCGCCGAGGTTGTTAAGATGGAGCCTGACAAGGCTGAATGGGGTTTCAAAGCTCTGAAGCAGACGGTGAAGATATACTATCGTC
TAGGGAAGTACAGAGAGATGATGGATGCGTATAGAGAGATGCTTACGTATATCAAGTCGGCTGTGACGAGGAACTACAGCGAGAAGTGTATTAA
CAGTATTATGGATTTCGTCTCTGGGTCTGCTAGCCAGAACACTGGTCTGCTTCAGGAGTTTTACCAGACCACCTTGACTGCCCTTGAGGAGGCT
AAGAATGAGAGACTGTGGTTCAAGACGAATCTTAAACTGTGCAACATCTGGTTTGACATTGGTGAATACAGACGGATGACTAAGATCCTGAAGG
AACTGCATAAGTCTTGTCAAAAGAAGATGGGACGGATGATCAGAAGAAAGGAGTCAGCTGCTTGAGTTTATGCCATTGAAATTCAGATTTACAC
TGAAACTAAGACAACAAAAGCTCAAGCAACTGTACCAGAAAGCACTTGCTATCAAATCTGCTATTCCTCATCCTAGGATCATGGGTATTATCCG
CGAGTGTGGTGGCAAGATGCACATGGCCGAACGTCAGTGGGCTGAAGCAGCCACTGACTTCTTTGAGGCTTTCAAAAATTATGATGAAGCTGGC
AACCAAAGGCGTATTCAGTGCTTAAGGTATCTTGTTCTTGCGAATATGCTGATGGAGTCAGAAGTGAATCCATTTGACGGTCAAGAGGCAAAGC
CGTACAAAAACGACCCTGAGATCTTGGCTATGACGAATCTGGTAGCAGCCTATCAACGAAACGAAATCATAGAGTTTGAGAAAATACTCAAGAA
TAACCGGAAGACAATAATGGACGATCCATTCATCAGAAACTACATGGAAGATCTGCTGAAGAAGGTGAGGACACAGGTGTTGCTGAAGCTGATA
AAGCCCTACACAAAGATCGGGATCCCTTTCATATCGAAGGAGCTTAACGTGCCAGAGAAGGATGTGACGGAGCTGCTGGTGTCGCTTATACTGG
ACAGCCGAATCGATGGACACATTGATGAGATCAACCGTTACTTGCTGAGAGGTGACAGTGCTAATGGAAGGAAACTTCACAAGGCGGTTGATAA
ATGGAACACACAGCTCAAGTCTCTTTCCATGAGTATCACCAACCGAGTCTGTTAATTTACCAATCCACCTCTCTCTCTCTTTTCCATAGCTTTG
ACATTTTCGTGTTTCTACCATTTTGTGGATTACATTTTTTTTCCTTCACTTCGCTGAATTCTCTTTTGATGGTGATATGTGAGTTACATTTTCT
TCC |
Primers for UN10325 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GAAGGAAACTTCACAAGGCG |
59.853 |
20 |
TTCAGCGAAGTGAAGGAAAAA |
59.982 |
21 |
180 |
1289 |
1468 |
2 |
ACAAGGCGGTTGATAAATGG |
59.823 |
20 |
TTCAGCGAAGTGAAGGAAAAA |
59.982 |
21 |
168 |
1301 |
1468 |
3 |
TTGCTGAGAGGTGACAGTGC |
60.187 |
20 |
TTCAGCGAAGTGAAGGAAAAA |
59.982 |
21 |
205 |
1264 |
1468 |
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