 |
Simple sequence repeat (SSR)
>UN01016
TTTTTCTTTTGGAGCAAAAGCTTAAAGAAACAAGTTTTAAGTCTTTGAACATCAACAGCAACATGTTTTTTTTATCACAATGTTTACTACTATA
TCGATAGCAACATGCTCTCTCTCTCTCTCATCCGATCACATTTATATGTCTCCAGTACACACTACGGAGGCATGCTTCATATGTTTGTTGTTGG
TGAAGCAATGTTGACCCCCAAATACTTGTCTAGTACATTCTCAAAGGCCTGAAATGCAAAAGCTTCTTTCCTAGTTAAAATGATATCCATCGCA
GCTGATTCATCATCGAAGGCACCATAAAATTCTCGATAAAACTGGCCCCTATCTTCTTCACCACTCTGTTGGTCAATCTCATCAAACTTCTGTG
TCAGGACTTCCGCAGCAACAGGTGATAGCATGTGGAGTATTAACGCTTCTAAGGTTCTTGGGAAATAACGTGCCATTGCAAGGAGTAGCATCCC
GAAGTTTAAATGCTTCAAGATTCCAAAGTATATGCGCAACACGATCGTCTTCTAAACAAGACAATGAATTCACCAGGATCTTGCTATTGTCCCT
TTCGGACGCTGGGTTTGAATAACTGGGTGGAGTGTGCTGCAGTTCCTTACTTGTATCCACAGCATTAACGTGGTCGTGGACTAAGGAAATAAGC
TCATGAAGTGCCAGGGAAGTAGA |
Primers for UN01016 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCTTTGAACATCAACAGCAACA |
59.366 |
22 |
GAAGCTTTTGCATTTCAGGC |
59.967 |
20 |
213 |
42 |
254 |
| 2 |
TCTTTGAACATCAACAGCAACA |
59.366 |
22 |
ATGATGAATCAGCTGCGATG |
59.788 |
20 |
254 |
42 |
295 |
| 3 |
TCTTTGAACATCAACAGCAACA |
59.366 |
22 |
GCATGCCTCCGTAGTGTGTA |
59.746 |
20 |
128 |
42 |
169 |
|
|
