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Simple sequence repeat (SSR)
>UN10409
GTAAATAGTCTTTTAGAGATTACTCTTTATGCTGTTTTTTCTGTTACATGTTGCTTGTTTAAAATGGGTTCCTGGCCGACTTGAGCAAAAGAAG
TAATAGACATCAACCGTTACATGTTCGTATCTTTTGCTATAAAGATCATTAAGATGGATTAATACATAAACGTTGAGATTCAATTCGATTGCAA
GGGAAGAAGGACGATGCAGTACAAAGAATCTGTACAATAAATATATATATCTTTAGTGTGGTAACTTGTATAGTTTGCTCCACTCTTCTTCGGT
TCATGCTTGGAGCTTGGTGCTCAGACCAGGACAACGATGATGACAATGAGTATAACAATCCCAAATATGAGTATAAGAAGGCATGTCAAGGATG
AGTTTGCTCTTTGAGTTTTAGATGCTTTTCTGAGTTGGGAAGTGGCTTGTGCAGTTGCAGCATGTGAATTATCAATGTTGGAGCTGATGTCATC
GATCATAACTCCTTGATCGTTGACTAAAACAGCTAGATCTTTGAAGATTTCATTCACTTCACCAATCTGTTCTTGAATTTCTCTGATTCCTTGC
TCTCTTTCCTCAATAATTGCTTCATTGAATGTTATCTCGTTATCTAGAAACACCACTTCTTGCCTTTTTGATTGTAGAAGAAGAGTTTGCTCCT
GGGAGGTCCTTAAAGATTCAATATCCAGTTCCTGTGCATTATAACTGGTAGGCATATCTTTAGTGACGACAGGAGTGTATGTTATTTCTCTTTC
AGCTGCAAGTCTCTGAGCTTTCTGAAACTCTTTGAGAACTGATTGGAAATCTTTCGCCAGTTTAGCATCCGCAATCTTCTTAATTGGAGTAGTT
GCTCCATGGAGGTCGGCTTCGCTAGCTTCTTTAAGCTTAGCAGACGTATTTTTCACCAGTTCTGATATCTGTAACCTTGTCTTTTGCAGCTTAT
CTCGCAAATCGAGAGTATCCTTAGGCGTTCCGATCGAATTAACGAGGCGGAAGAAGGAATTGACGGCCGTGCTGATCCTGAAGATCCCGGCGGC
TACCTCCTGAGACGGATCTCCACGAGACAGAGGTTTCTGCTGCTGCCTCCTCCCGCCGGTGAAACGATTCGGCGATTGGAATCGAGAGCCAGCT
TCGAGATCTTGGAAACTCATCCTGCTCTTCTTCTTCTTCTTCTTCTTCTCTCGAATCTAATCTCTCTAGCAATGGGGGAACGATGATTGGCAAG
AGTTAGGTAAATACGTTTTCCCCC |
Primers for UN10409 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TTCCGATCGAATTAACGAGG |
60.031 |
20 |
TTCCCCCATTGCTAGAGAGA |
59.767 |
20 |
241 |
968 |
1208 |
| 2 |
GAGACGGATCTCCACGAGAC |
59.799 |
20 |
TTCCCCCATTGCTAGAGAGA |
59.767 |
20 |
166 |
1043 |
1208 |
| 3 |
GGATCTCCACGAGACAGAGG |
59.792 |
20 |
TTCCCCCATTGCTAGAGAGA |
59.767 |
20 |
161 |
1048 |
1208 |
|
|
