 |
Simple sequence repeat (SSR)
>UN10566
GCATCGGGGGATTCTCACATAGATCTCCAACGATCAGGAAGTTGGGCCCATGAACGTGATGAAGGAGAAGAACAGGTTTTGCAACCTACAATAA
AGCGGAAGCGGAGTATTCGTCTAAGACCCCGTCAAACAGCAGAAAGAATAGACGGTATTGATATGCCTGCATCTCAGCCATTGCAAGTCGATCG
TAGCTATCGATTAAAATTGAGGACAGTTGTTGACTCGCATGGTTCAAGACAAGAACAGAGTGATTCGTCCTCGAGACTTAGGAGTTTACCTGGA
AAGAAAGTAGCTAATACTTCCAAGCTGCATGTATCATCACCAAAATCTGGTAGATTAAATGCCACCCAGGAGGACAACACTGAAGCTGCTAGAG
AAACATGGGACGGAACTAGTCCTATTGGCTCTTCAAGTGCAGGTGCAAGAATGTCCCACAACATACAGAAACGGTGCAAAACGGTCATTAGCAA
ACTCCAAAGGAGAATCGATAAGGAAGGTCAGCAGATTGTGCCTATGCTGACAAATTTGTGGAAGAGAATCCAGACTGGTTATGCAGCTGGAGGT
GTAAATAATCTATTGGAACTGCGAGAGATTGATCACCGGTTAGAAAGGCTAGAGTACGCAGGGGTTATGGAACTCGCATCTGACGTGCAGTATA
TGCTAAGGGGAGCAATGCAATTCTATGGATTCTCACACGAGGTGAGATCTGAAGCAAAGAAGGTTCACAGTCTGTTCTTTGATCTACTGAAGAT
GTCTTTTCCGGACACAGATTTCCGAGAAGCAAGGAATGCTCTTTCCTTCTCTGGCCCAACCCCGACTTTGGTATCCACACTATCCCCAAGAGCA
GCAGGTAGTAGTCAGGGTAAGAAACAAAGCTCGGCGGGACATCAAGCCACACCGATGACTCTCCAATTTTAACTCATCCAGGGGAACTAATAAT
CTGCAAGAAGAAGAGGAAAGACAGAGAAAAGTCTGCTCCAAGAACCCGAACCGCTGGCTCAAGCAGCCCGGTCTCACCCCCAGCTATGGTAGGT
CGTGGTCTTAGAAGTCCTGTGTCTGGTTCAGGTACAAGGGAAACAAGGCTAGCTCAGCAGCAACGATGGCCAAACCAAAGCACACATCCAAACA
ACAGCGGTACGGCTGGTGATTCAGTGGGATGGGCTAATCCTGTGAAGAGGTTAAGAACCGATGCTGGTAGAAGAAGGCCGAGCCATTTGTAAAC
AGATTGAGCCTCTTTTTATCCTTTTAGTGCTTACAGGTGGTGGGTGATATGCAATGTGGCAATTGAAAGCAATCTAGCAGCGAGTCTTGGACTT
ACCTTAGTAAAACAAATAATAGTATTCTCCCTTCTTGGTATGTTGCTATTTAGAAGAATATGTCCTTTTGTCCGCAGTATCCTCCCATCTTTAG
ATATGTTCTTTGTATAAAAAAGAACGTTATTGGAGAGATGAATTCATGTTTTATTGTAGTAAGGTTGCAAATTGTTATATGTTATTTACATTTG
AAGCAAATGAAAGTTTCAATGATCCTAAAAGAATTAACACAAGTCTTTACACATTTACAGAGGAAAGTTCTTACTCCTCCCATGCAATGAACAT
CAATGGTTTATATTTTTGGAAATGGACTAATAAATCAAAGTACAAAGAGAGATTTGATTTGTGACGAAGTCATCAAGGATCAGCTTTTCCAGCA
ATTTCATCGTTGTCATCAGAGTCTGAACCACGTTCGCTCATGCTATCATCATCATCATCGTCATCATCACTTGAGATCTCCTCAGGTGCTCCTA
TATCCTCTGGTTTAGCATATCTCTTGCAATATTCTTTGACTTTGAGCTCATAGGCAGGGCGGTCTCGCATCAAGAGAGAGGCAGCTTCACCATT
GAAAGGATCAGATGGGTTTGGATATAGAAGCAATTGAGGAAGGAATGACTCGAAGACATTGATAAGATCAAACATTGGACTCCATGTCTGGTTT
ATTACATCTAAGCAAACTGCGCCAGAAGATTCATCAACATTGGGGTGATAAATCTTGTTAACGAAACCAACAGAAGGAGATTTGTAAGGATAAG
CATCAGGAAGTTCGACTTTGATCTTCCATACACCTCCTTCATAAAGACTGTCAGTGGGGCCATGGAAAGTGACGTAGAACATATGCAAATCGTC
GTTGATTGTATCGACCTTGTAATCACTCATCATCAATTTCATCATGTCCATCTCTCGGCGTTTGCTCGGCGAAGCCATCTTCTTCTTTCTTCTT
CTGGTTTGATAGAGAGAGAGAAGAAGAAAATAAAATTATTGCCTAGAGAAAATGAAACTATCC |
Primers for UN10566 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AAGGATCAGCTTTTCCAGCA |
59.955 |
20 |
AGCTGCCTCTCTCTTGATGC |
59.857 |
20 |
200 |
1673 |
1872 |
| 2 |
CAAGGATCAGCTTTTCCAGC |
59.955 |
20 |
AGCTGCCTCTCTCTTGATGC |
59.857 |
20 |
201 |
1672 |
1872 |
| 3 |
AGGATCAGCTTTTCCAGCAA |
59.955 |
20 |
AGCTGCCTCTCTCTTGATGC |
59.857 |
20 |
199 |
1674 |
1872 |
|
|
