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Simple sequence repeat (SSR)
>UN10638
GGGAGGAAAAGGAAATCGCAGAAGCTCTAAAATCAAAAAGCTTTCAGATCTTATAGAAGAAAAGAACCTAAGCTCTCTCGAAGAAGAAGAAGAA
AGAAGATGACTTTTACTATTCCGATCGAGAACGGAGATTCCGTGAAGAACGCAGAAGCTGATTCACAAAGAACACTGTACCCGTATGTTACTGG
GACTTCGATCGTCGCAATCAAGTACAAAGATGGGGTTTTAATGGCTTCCGACATGGGAGGTTCATATGGATCCACCTTAAGGTACAAGAACATT
GAGAGAATGAAGGCTATTGGTAAGCATTCTCTTCTCGGTGCCAGTGGAGAAATCAGTGACTTTCAGGAGATTCTCCGTTATCTTGATGAGCTCG
TGTTGAATGATAGCATGTGGGATGATGGTAACTCTTTGGGACCAAAAGAGGTGCACAACTATCTGACCCGAGTTATGTACAACCGTCGCAACAA
GTTTAACCCTCTCTGGAACACTCTCGTCCTTGGAGGTGTCAAGAATGGCGAAACTTACCTTGGCATGGTGTCAATGATTGGTGTTAGTTTCGAG
GACAATCATGTTGCCACCGGATTTGGAAACCATCTCGCTAGGCCTATTCTTCGTGATGAGTGGCATGCGGATCTAAGCTTTGAAGATGGTGTCA
AGCTCCTTGAGAAATGTATGCGTGTGCTTCTCTACCGTGACAGATCTGCTATTAACAAGCTTCAGATAGCGAGATCACAGAAGAGCGTGACGGT
TCTCAGCCATACTCATGAAGACATCTGGGAATCAAGCGTCACATCCGACTGCTGGTGCTGAAGCTCCT |
Primers for UN10638 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GAGGAAAAGGAAATCGCAGA |
59.387 |
20 |
GGAAGCCATTAAAACCCCAT |
60.02 |
20 |
235 |
3 |
237 |
2 |
GAGGAAAAGGAAATCGCAGA |
59.387 |
20 |
TGTCGGAAGCCATTAAAACC |
59.938 |
20 |
239 |
3 |
241 |
3 |
GAAAAGGAAATCGCAGAAGC |
59.046 |
20 |
GGAAGCCATTAAAACCCCAT |
60.02 |
20 |
232 |
6 |
237 |
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