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Simple sequence repeat (SSR)
>UN01056
GGATAAAAAAGTTATTGCCTTGTCTGGCGCTGGCACATGGGTTTACAAATAATATATCACATAATCGTATCAGACACGACACCATTTCCCATAA
GAAAAAAAAATAGAAAGATTAAATAAATAATAATATATATCTCCATCAAGCAAAAAAAAAATAGAAGAGATATACAAAGGTGGTTGCAAGAAGG
TAGCAGCAGCAGCAGCAGGTACAGTTTACAAAGGAACCAAAGGACCCCCTTACGATGTAGTAGTGTCCCAAGTTGTTGTTGGTGTCTTGGAACT
CCACTCTGTTCTTCCTCTGACCACTTCGGCTCCATCCTGGAGTCGAAGTAAATGCTGACACTCCACTTCCCCGCCTGTCTCGAGGTTACCGACA
TCACATCCAGAAACCGCGGTGAGAGACTGAAGCACACTGTCTCTTCCGCACTCCCTCCGATACTCCAGAGTCATGCTTTTCAGTTTCTGACTCT
CCAACATCCCTGCTGGAGCACTCTCCAGTATCCACCCAATGTACTTTACATTGTTAACATGCTGGTTAACATCCAAGTCACTCCACCTCGGAGT
GAGACCAGAACGAACATAGTCAGCGGTCTTGTCATCAAGTTTGGTTAACTTTCTGCTGTCTTCAGCAATGACAGGATCAGAGTTCACAAAATAA
GGCTCTATTTCCCCGCGAACCTC |
Primers for UN01056 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AGTTATTGCCTTGTCTGGCG |
60.27 |
20 |
GGGTCCTTTGGTTCCTTTGT |
60.204 |
20 |
226 |
10 |
235 |
| 2 |
AGTTATTGCCTTGTCTGGCG |
60.27 |
20 |
ACATCGTAAGGGGGTCCTTT |
59.691 |
20 |
237 |
10 |
246 |
| 3 |
AGTTATTGCCTTGTCTGGCG |
60.27 |
20 |
GTAAGGGGGTCCTTTGGTTC |
59.668 |
20 |
232 |
10 |
241 |
|
|
