 |
Simple sequence repeat (SSR)
>UN10832
GGGAAAGCCAAGAAGCTCTAGGTTCCTCTGCTCATGCTCATGGAGGAACCCATCACACAGAGCTTCTTCTCTCTCCCTAATCTTCCTCCTGAAA
TGATGGAAGAGATTCTCTTGAGACTACCGGTAAAGTCACTGAGGCGATTCAAATGCGTTTGCCTCTCGTGGAGATCTTTGATCTCAGAGTCTCT
GTTTACTCTAAAACACGCTTTGATGTTGGAGGCGTCCAAGGCAACCACTTATAAGAAGAGTCCGTACGGAGTCATCACAACGTCTCGGTACCAT
CTCAAGTCTTGCTGCGTCCACTCTCTGTATAATGAGCCAATGGCCAACGTCTTTGAGCACGATGGTGAGCTTTTAGGCAGGGATTACTACCAAG
TCGTGGGGACCTGCAATGGGTTGGTCTGTTTCCATGTAGATTACAACAAAAGCTTCTACTTGTGGAACCCGACCATCAAGGTTCAACAAAGATT
GCCTGGTTCGGATCTTGAAACGGGAGATGAGGTTGTTGTAAACTATGGGTTTGGTTATGATGAATCTGAAGATGACTATAAGATAGTTGCATTG
TTGCAGCAAAGACACGAACTGAAGACAGAGGCAATGATCTACTCAACGAGACAAAAGCTATGGAGAAGAAGAAGCAGCAGCAACACTTGCTTTC
CATCTGGAGTTGTTCTTGCTAACAAGTCAAGATCCGGCATCTACATCAATGGAACACTAAACTGGGCAGCCACTAACTCCTCCTCATCATCATC
ATCAGTTTCTACCATCATATCATACGATATGTCACGAGATGTGTTCAAGGAGCTTCTTGGACCAGGTTGCTGCAAGAGAGGATGTTTTACATTG
ACGCTTGGAGATTTGAGAGGATGTCTTTCCATGGTGTGTTATTGCAAAGGAGCAAATGCAGATGTTTGGGTGATGAAGGAGTTTGGAGAAAGAG
ATTCTTGGTCTAAACTCTTGAGCATTCCCGGTTTGACCGAGTTTGTTAGACCGCTTTGGATCTCTAGAGGTTTGGTGGTTTTGCTGGAGTTTAG
ATCCGGTTTAGCTCTCTACAACTGTTCCACTGGAAAGTTTCAGTACCCAGTTTCAGACAGCTTGAGTGGTTGTCGGGACGCTAAAGTCTATGTC
AAGACATTGGTTTCTCCGAATGACCTTTAAGATTGGCTCTTACCAGATTTGGTCCAGTTTATCTGCACACCACTGTTATACATCTACTTAAAAG
AGTTTTTTTTGTTGGTTCTCTCTTTAGTTGTAACGTTACATTTTCATGTGGGAAACAACATAAGAAAAGCAATCAGTCAAATGTTCCTAACAAA
ATCATCACTATACCAATAACACATCATCTCTGCTTTTGAGGCTTCTTCTTCTTCTTAGGTGCTCGCATCAAACAGTGGGATGATAAAAAAAATC
TCAGGAGGATACTTTTTCGGAGGTGGAGCTGAGACCAGATCCTGAACTGGTGAAGACAGGATTGTCTCTAGGCGTAGAGGAAGCTCCACGACCA
CTTGCACTGTTTCCCATATCTTTAGTCTTATGAAGCAGAAACGTTCCTGACAAAATGGTGACAAAACCGCACAGTTCTGTCGCTATCTTTAACC
CGCTCTGCGAAGCCCAATCCTTGAACATGATCATACTAGCTATGATGGTGAAAGTTGTGAACATAACGAAGTAAACCGGAGAAATAACCGCCGT
GTTGAACGTATCCAATGCCTTGTTCAAGTAATTGATTTGCAGAATGCAACAAACCGTGACTACTATAATAAAAATCCAAGTTTGGAAGTATTTG
AACTGATTCATCTCCGAAAATGTTAGCTTTATGGCGATGGCCACAGCTTTCACACTCATAACAGTAAGAGAACCCATTAAAGAGCAGATTCCAA
CATAAACTATCAAATGAGTCTTCCCATAGCGAGGTTCATAGTAGAAGATGAGTACAAGCACCGCAATCAATATCACAGCAGAGTACACTAGAAA
GCCAGGTTCAATAGCAAGCTTCCAAACTTGCTTGACTGATTTTATTTCCTGCTCGTGCGGGGCGTGTAGGACTATCGTTGTGGACCCGACAACA
CAGAGAACGCAACCAAGTACTCCGAACATATGAAGTTTCTCTTGCAAAATGAAATGAGCTAGCACTGCGCTGAAAATAATACTTAGAGCTCCCA
AAGGTGTTACTAGAATAGCTGGTGCAAATGCATACGCTGCGAAATTGGCTACTTCCCCAACAATCATTGTAATCATTCCAGCCCACCACCATGG
TTCATATAAGTATCCATGTCCTCCTTCACCTGCTCGGACACCGGATTCACCGGCCTTCTTGAGACCTTTTTTCTTGATGATGAAGCTAGAGCCA
ATAAAGATACTTGAGGAGACTGCTAATACGAGTCCATTAATGTTATCAGATGACATCTGATCCATCTTGGCTTTGTTTATATATAAGAAAGATG
AATCAGCCCTGAGAGATTAAAATTAAACTCCTCCTACAAGAGTTAAAATTGTTCCACCTTTTAAATCTCACATTTAATTATTAATTCTCTCCAA
TCAATTTTTTATTTATAAAAAATTATGTAGGAGAGACAAGCAAGGGAAGAACATGACAGACACTTATATCCAATCGTTTCACACATCATAATCA
AAACACGGAACTCAAACACGGTTTCAGATTTACAATCCAGACAAAACGAATTACGGAGAAAAGTAACAAAGGAGGGAATAATATCTCGCGAGCA
AGAACGTGGCCCTCTTCC |
Primers for UN10832 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TTGGTTTCTCCGAATGACCT |
59.526 |
20 |
ATCCCACTGTTTGATGCGA |
60.064 |
19 |
263 |
1135 |
1397 |
| 2 |
TGGTTTCTCCGAATGACCTT |
59.526 |
20 |
ATCCCACTGTTTGATGCGA |
60.064 |
19 |
262 |
1136 |
1397 |
| 3 |
TTGGTTTCTCCGAATGACCT |
59.526 |
20 |
ATCCCACTGTTTGATGCGAG |
61.067 |
20 |
263 |
1135 |
1397 |
|
|
