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Simple sequence repeat (SSR)
>UN10874
GAATTGAATGAAACCAAATAAAATTCACTAAAAAAACAAAAGAGAGTAACACCGTAACTTTGCAATTTGCAAGAGTTCTACATAGGACAGAGCA
CAAAAAAACAGAAAAGGAAGTAACTTTGCAAGTGTTTATGTTCTTTCTTCAAGTAGTAGCTTCAACTTCTGCATCAGTTTCGACAGGGGAAGCA
GAACTCTTCTTTCCTCGACCTCTTAAACGGGAAGAGACATTGTCAATAGCCGAGTTAAGCTGTCCGATCTTCTCGTTCAAAGTCTCCCTTGTTT
TCTCCAAACCTTCATCGTAGTAACTTGGTTGCTCTGGCTTCTTGAATCCATACTCATCTTCTTCACTCATTATCGATCTTCGTATCTGTGGAGC
AAAGATGTAGGCGGCAGCGCCAAACAAAGCACCTCCAAGAAGAAAACCAGCTACGAAATCACCACCACCACCACCGCTTCCTCTCCTTCTCCCA
TACTCTGCAGATACTGAAACGTTGCGAGTCCGGTTTGATTTCTTCTGGATACTCAATGCAGAGGATTTACAGATCGAATTGAGTTTTGTGGTGG
ACAGTCCATTTGCATTCACATAATGAGATTGGGAACCACCTGAGAGAGAAGGGTGAGGAACACAAGAGGACGCCATTGGAAATGTAAAACAAAG
AGATCTGATCTCC |
Primers for UN10874 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GCTGTCCGATCTTCTCGTTC |
59.957 |
20 |
CCAGAAGAAATCAAACCGGA |
60.044 |
20 |
272 |
247 |
518 |
2 |
CTTGGTTGCTCTGGCTTCTT |
59.615 |
20 |
CCAGAAGAAATCAAACCGGA |
60.044 |
20 |
213 |
306 |
518 |
3 |
GCTGTCCGATCTTCTCGTTC |
59.957 |
20 |
CGCAACGTTTCAGTATCTGC |
59.493 |
20 |
250 |
247 |
496 |
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