 |
Simple sequence repeat (SSR)
>UN10888
GGGCCTCATTCTCCCTCCTTAGCTCATAAGTTTATTGCTCTTTCACAAAAAAAAGTAGAAATAATTTTTGCCAATGGCTCTGCGTGGAGATGAG
CATGAGTTTATGAACTTAAGAGAATGGGATCGAAGAGCTCGATTGATCCTAGAAAACCCTACTTCAAGAAGGTTCTCTGCTTCCTACGTTGGAA
GCTTTAGAGAAGATCATAAGTCTTCTTCAAGAACAAACTTAAGCAACATCTCTAGTACTGCCTCTTCTCCTGGCTACACCCTCAAAGACGAGAT
TGACCCAGCAACATATTCCTTCACCAATGCACTCAAGGCGTTACAAGCGAAGACAAAGTTTAATAACAGAGAATGGTTAGCACAAGAAGGATTT
GCGTTGAATTCGAAGTGGAACGAAGCAGAGAAATATATATGTAATCCAGTGTCTGGAGAAGTTCCAATGGAGTGTTTGTCTTCTAAAACACTAA
GTGCAAGATCTTTCAGAAACTTGACCACCATGTCTGCTCCTCTTCACTACCCTAATCTTAATCCATTGGTAAATAATATTGGTCCAAACAAACC
TAATGATAATCCCCAACGTTAGAGTTATCCACGAGGATCTTTATGCTCCTGATCCTGTTCTTGTTCGAGAAAAGAAAGTTGTGGGGCTGAAACA
AGATGTGGGCATTCAGAGTACGTCGGTGGATCTTAGCTCCGGTAGCCCTAGTCCGGCAAAGACGCCTACAATCATGGAACGGTCACTGAAACGA
CACGTGAAGGATAATGATTCGCCAGTGGATTTTACTCTCAAACTAGAAGGTCAACAAGAGGATTTGAAGTTAGAAGAGAAGCAAGGGATGAGTA
CTAAAGAAGAAGAAGAGATGCACGAGATGAGTAATAATAAAGAAGAAGAGAAGCAAGAGATGAGTATTAAAGAAGAAGAAAAAAATGAAGAAGC
AGAAGAAGAGAGGAGGTGGATGCTTCTCATGGAGAAGATCAAAACAAAGAAAACCAAAGTACATCTTCCCTATTTGTGTTCCTCATCTTGTCAA
AGGTTGTTGAAACAACAAGGAGTTTCTACAAAAGCAACAAGAAAGAACTTCTTAATGAGGTTATTATTATTATTATAAGTATTAGTCTTCCCTC
TTCATATAAGATAATTCATCATTTATGGGAATGTCAAAAGCTTAACAGTTCTTTTGCTCTCTCCCCTTTTCCTCTCTATAACAAAATATGCTTC
TCTCTTAGAGTCCCCCATCTGTTGTGCTTTCTTCTTCTTCATGATTATTCTCTGTTTCCTCCTCCTCCTCCTGATCAGCCTTCCATTCCATAAT
AGCTAGAGTGTGTCGACCCCCACATGCCACAAACTTAGCTATCCACTTTCCATCCTCTTCTTCATCTGCGTGGTTAAACTGTCCTTCGGGTGGT
GGAATCTCTATAGGAAGCTCTGATGGTTGTCCCGTCGTCACTTTTCTTCCATACCCGAGTCTACCATGGTCTCCCCTACCAAACGAGAAGATCC
TACCGTCTCTTGTCAAAGCAACTGAATGAGTTCCACCACATGAGACCTGAATGATGTTTTCTCCAGCCAAGAGATTGACTTTCTGTGGAACCAT
TTTGCTGCTCTTGTCATTGTCACCAAACCCAAGCCTACCATGTTCCCCTCTTCCCCAAGCATACACCTCTCCTTGTTCGGTTAAAGCTGTTGAA
TGCCATCCACCAGCAGCTATATCAACCAAAGTGAGATCATCGAGGCCTTGAACAGGAATAGGATGAGATCTAGGTGGGTATCTCCGGTTCCAAG
TTGTCCATATTCATTATTACCCCAAGCCCACAGAGTCCCGTCTTCTTTGAGAGCAAGTTATGAAAGCTCCAACAGCATCAGACGAACGTTTTCA
GAC |
Primers for UN10888 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AGAGTCCCCCATCTGTTGTG |
59.962 |
20 |
CCCGAAGGACAGTTTAACCA |
59.964 |
20 |
178 |
1229 |
1406 |
| 2 |
CCCCATCTGTTGTGCTTTCT |
60.111 |
20 |
CCCGAAGGACAGTTTAACCA |
59.964 |
20 |
172 |
1235 |
1406 |
| 3 |
AGAGTCCCCCATCTGTTGTG |
59.962 |
20 |
GAAGAAAAGTGACGACGGGA |
60.232 |
20 |
231 |
1229 |
1459 |
|
|
