Simple sequence repeat (SSR)
>UN10908
AGGAGTGAGAGAGAGACTTCCACAACATTTTCAGACACAGAGAGAGAGAGAGAGAGAGAGGCGAATAAAAGAGATCCGGAAGAGTGTCGACGGC
GATAGTACGTTCAGCACTTTCACGGGCAGCGATGGGCGCGGCTCCGAGGACATCCGCTGCCCCCAAGCGCAGATTTTTATCTTCTGCCGGCCAT
GACGATGCTTATGAAGCAGCAAAGTGGGAGAAGATAACATATCTGGGAATTGCTAGTTGCACTGCTCTAGCTGCCTATGTTTTATCTAAGGGTC
ATCATCACGGCGAGGATCCTCCTGCCTATCCATATATGCACATCCGCAACAAGGAGTTTCCTTGGGGTCCAGACGGTCTGTTTGAGGTGAAGCA
CAACGAAGGGCACTGAAATGTTTGCGTCTTTACAATAAATTTTCTTCTTGTTCATTTGATAGGCTAAATTGCTTATCGTCTTTGTTTTAAACGT
TGTCTACTATTTGCTACACCACCTTTGTTGGGAAATAAGAATGGTAACTTTGTTTTGTTATTATCAAATACTTGTGGTTC |
Primers for UN10908 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GGAGTGAGAGAGAGACTTCCACA |
60.044 |
23 |
CCGTGAAAGTGCTGAACGTA |
59.904 |
20 |
118 |
2 |
119 |
| 2 |
GGAGTGAGAGAGAGACTTCCACA |
60.044 |
23 |
TCTTCTCCCACTTTGCTGCT |
60.134 |
20 |
221 |
2 |
222 |
| 3 |
GGAGTGAGAGAGAGACTTCCACA |
60.044 |
23 |
GCTGAACGTACTATCGCCGT |
60.3 |
20 |
108 |
2 |
109 |
|
|
