 |
Simple sequence repeat (SSR)
>UN11001
GGATAATGGGGAAAACAAGCAAGTGGATTCGGAATTTCTTAACCGGAAAGAAAGAGAGAACAAAAGAAAAGATTAATCAGAGCGAGTGTGGATT
CACTTCTACTACTCCAGGCACTTCTAAAGAGAAACGTCGATGGAGTTTCAGACGTTCTTCTGCTACTGCACCACCAGCTTGTGCTTCTACCCTC
AAAGATTCATCTCCACCACCTCAACCGCCACCTCCTCCACCCCCACAACAACCATTTGTGGTGGATAGCGAAGATGAGCAGAGCAAGAACGTTT
CAGCCGTAGAGGTTGCAGTGGCTGTTGAAGAGTTTGCAGCAGTGAAGATCCAAGCTTGTTTTCGTTCTCATTTGGCGAAAAAAGCATTAAGAGC
GTTAAAAGGGTTGGTGAAACTACAAGCACTTGTGAGAGGTCATTTAGTAAGGAAACAAGCAACAGCTACACTTAGATGTATGCAAGCATTGATT
ACACTTCAAACTAAAGCTCGAGAACAGAGGATCCGTATGATCGAAGATTCGCCGATAAAACCCACAAATCCAAGAACATCGATTCATAAAACCC
TGATTCATAACATTTACAACGAGAATGAAGAAAACATCAAGATTGTGGAAATGGACACTCAGTCTAGATTTTACTCTCCAGCTCCTTCGGCTAT
AACAGACATGAGTCCTCGAGCGTATAGTAGCCATTTCGAGGATTGTAACTCGTTCAACACAGCACAGAGCAGTCCTCAGTGTTCCAGATTCAAA
GAGTCTTACAATGGAGATTCTTTGTCTTCTTACGATTACCCTCTCTTCCCAAACTACATGGCCAATACTCAGTCTTCTAAAGCCAAGGCTCGGT
CTCAGAGTGCGCCTAAGCAGAGACCTCCTGAGATCTATGAGAAGCAGCCAAGCGGGAGGAGAAGATCTTCCATGGAAGCACCGAGGAACGGTGT
CCCCAGAGCTGTAAGGATGCAGAGATCTTCATCTCAGTTAGGCAAGGAAAGTCAAAGTCATCATCATCATCATCATCCGTGGATGGCAATTAAG
CTCGATAGATCTAACGTTTCTCTTATGGAGAGTGAATGTGGATCTACCAGTACTATTATGACCAATAGCAACTACGGTAGACATGTTGATGTGG
GTTTGTGAAAAATTACTTGTTTCCCAAGAAATAATTACATGAGGTAAATCTTCATGTTTATTTTTTTTGTAAACTAAAATCTTCATGTTTATTG
CTCTCTTGTTCCTGGCT |
Primers for UN11001 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCTTCTAAAGCCAAGGCTCG |
59.724 |
20 |
ATCGAGCTTAATTGCCATCC |
59.142 |
20 |
216 |
825 |
1040 |
| 2 |
GGTGTCCCCAGAGCTGTAAG |
59.721 |
20 |
ATCGAGCTTAATTGCCATCC |
59.142 |
20 |
105 |
936 |
1040 |
| 3 |
GAGTGCGCCTAAGCAGAGAC |
60.307 |
20 |
ATCGAGCTTAATTGCCATCC |
59.142 |
20 |
190 |
851 |
1040 |
|
|
