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Simple sequence repeat (SSR)
>UN11060
ACAACGCTTTTGATTCTTCGCCGACAAACAAAAAAAAGAGAAAAAAGAACCCTGTAAACCACCGGTTCGTCGGAACTCAATGCCGGAGAATTCT
TCGTCGGTAGACTGCGCCATGGAGAAGGCATCAGGCCCACACTTCTCCGGCCTCCGCTTCGACGGCCTTCTCTCTTCTTCTTCTTCTCCACCCA
ATTCCTCCGTCCCTTCTCTGTCTCACCTCCTTTCTGCTGTCCCTTCCTCTTCTTCTTCTTCTCCTGACGCTCCCAAACAGCCCTTCGTTATCGG
GGTATCTGGTGGTACGGCATCTGGTAAGACAACAGTGTGCGACCTGATTATCCAGCAACTTCATGACCATCGTGTTGTTCTAATTAACCAGGAT
TCGTTTTACCGTGTTTTAACAACTGAAGAGCTGCAGCGTGTGCACGAGTACAACTTTGATCATCCTGATGCGTTTGACACGGAGCAGCTTTTGC
ATTGTGCTGAGACTCTCAAGAGCGGCCAACCTTATCAAGTTCCCATCTACGACTTTAAGACCCATCAGCGTAGATCTGACTCTTTCCGCCAGGT
GAATGCTTCTGATGTTATAATTTTGGAAGGGATTCTTGTTTTCCATGACTCCCGAGTTCGCAATCTTATGAACATGAAGATCTTCGTTGACACA
GATACTGATGTGAGGCTTGCTCGCAGACTCAGGCGTGACTTAGTTGAGAGGGGCAGGGATGCCGAATCTGTCCTCGACCAGTATGCAAAGTTCG
TGAAACCGGCGTTTGATGACTTTGTCCTTCCCTTTAAGAAATATGCTGACGTGATCATTCCTCGAGGAGGTGACAATCACGTCGCTGTTGATTT
GATTACCCAACACATCCACACAAAACTCGGGCAGCATGATCTCTGCAAAATCTACCCAAATGTTTATGTCATCCAATCAACATTTCAGATAAGA
GGCATGCATACACTTATCAGGGAGAAGGACATATCAAAGCATGATTTTGTGTTTTATTCAGACCGACTCATTCGTCTGGTGGTGGAGCATGGTC
TTGGTCATTTGCCCTTCACTGAGAAACAAGTAGTTACTCCAACAGGATCTGTGTACACTGGAGTTGATTTCTGCAAGAAACTTTGTGGGATCTC
TATTATTCGAAGTGGTGAAAGCATGGAAAATGCATTACGCGCTTGCTGCAAAGGGATTAAGTTAGGGAAGATTCTTATTCATCGTGATGGAGAC
GATGGAAAACAGCTTATATATGAGAAGCTTCCTCGCGACATCTCTGAACGCCATGTCTTGCTTCTAGACCCTGTCTTAGCTACAGGTAACTCTG
CTAATCAAGCCATTGAACTACTCATTCAGAAAGGAGTTCCTGAATCTCACATTATATTCCTCAACCTTATCTCGGCGCCAGAAGGAATTCATTG
TGTCTGCAAACGGTTTCCGGCATTGAAGATTGTGACATCTGAAATAGACCAGTGTCTGAACAAAGAGTTCCGAGTTATACCAGGTCTAGGCGAG
TTTGGTGATCGTTACTTCGGCACTGACGAGTAAAACCATGAGCCACCACTAAACATTGTGGCTGGATGGAGCAATAAAGGACGCGTTAGTGTCG
TAATAGCTTGAGACAATAGTTGGAGTTGCATAACTGCATGTCCTACACAAGAATCTTCTTAGCTCTTATGATTTATCAAGCTCTTATTAAACTC
GAAATATTCTTGAACACATTGATTTCTGATTCTATGTTTTTTAATTACCAATTTTCTTACTTCT |
Primers for UN11060 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CTGTAAACCACCGGTTCGTC |
60.41 |
20 |
AATCAGGTCGCACACTGTTG |
59.751 |
20 |
280 |
52 |
331 |
| 2 |
CTGTAAACCACCGGTTCGTC |
60.41 |
20 |
TGTTGTCTTACCAGATGCCG |
59.716 |
20 |
265 |
52 |
316 |
| 3 |
CTGTAAACCACCGGTTCGTC |
60.41 |
20 |
ATGCCGTACCACCAGATACC |
59.7 |
20 |
251 |
52 |
302 |
|
|
