 |
Simple sequence repeat (SSR)
>UN11114
AGAATCCAGTTATTTTGTACTAATACTACTCAAATGGAAGCAGAGAAAAAAACATCAGTAAGAGCAGTAATAAACTTGAGAGACGAGTCTTGAC
AAATCCTACATTTTTACCCGCTAAACACAAACCCAACAACTATTGCAAAACCCCCCCCCCAAGACAAAGGCACTGCTCCGAATCATGTATCACA
TAATAATGGAGCAAAGCACACAAAGGAAGACACATGATACAATAAAAGTTAAGTTGTCACGGTTTGAGATGGCAATTTAGGGTGGTTATGCTCT
GCTTCATAAGTAACAATAAGCATAGCAGGATCTTCCAAGCATCTCTCAACGTGCTTCCTCGCTGGACAAGCTCTCATGCTACTGCATTTGTAAT
ATCCTCTGGGATAAGGAGAGCCCTTGATGGGTTTCTGACCATACTTTCCCCACGAATAATCATCAGGAGGGATATCTGAAACCTTGTTACTGAT
AGCAGGCACTCTGATCGATCTCCTAACCCTATGTTTCCTCTTCTTAGAGCAGTGGCATCGGCTAGAGCTCCCGCATTTCATGCTTCCATGCTCG
CCTCCTTTCATGAGGCATCTTCTCTTAAAGTGTGATAAACTCTGGTCCCCTACCAAATGGAAGGAGTTCCTTCCTTCTACATTAGCAACGCTAC
CATCAATGCTAAGCGATGAAACAAAGGACCTTGTGGATGACATGGTTTGAGTACAACTCGAGTTATCAAAACTCAAACTTATCCCGCCGTTGCA
CTTCCTTAGCATCATCATCTCAGCTTGACGTCTCTGTAGTTGTTGCTGCTGCTGCTGCTGATGATGATGGTGAGCCTGTAACCGTTCATGTAAC
TCTTGTTGCTGTCGATGTTCAGGAAACATATTCAGATCATTTGAAGAAGGCATTGCCTGGTTAAGCTGAAGGAGAGGCGCTTTTGCTTTTGCAT
TTGAGTTCAAACTGAAGGACCTGGTCCCTAAAGTGAGGGAATCAGTGCTCAACTCATGGAAACCAGACCGGAGCATCACCACCGGTGCTTTCTG
AGATGGTGGAGGTTCTGTTCTTTGGTGAACAGGATCAAGGAAGATGGTTTGAGACAAATGAGACTGAGGTTTCTTGTCTCTTCTAAACCTGGCA
TGACCCACACTAGTACTTAACAGACTCCCCACTCTCTCGAACCTAGACACAGCTCCTGTACTTTCGGACACTAAACTCACATGATCTTGTTGAT
GTGGTGTACATAAGAGGTTAAGAACTCTATGACAAGACTCTACAGCTGCTCTGTTTGCTCCTTCAATATCCTCCATGTCTTAAAAAGTTAAACA
ACTAAATAAACCTCCTAAAGAAGAAAATAACTAATTAGAAACCAAAATGGGAAAGACCCAGATAGTAAAGTTTCCGTTTTTACACAATCCCATC
TCTCCACAGGAGACACCAAAAAAAGAGAAGAAGAAGTTGCGTTTCTTAAAGCTTGAAGAAGAAAAGATACTACAAGCTTTTATCAAAGGAGGAT
CAAACTGAAAGGAGAGAATGATGAGGAGGAAGTGAAAGCAAAAACGGAGGAGGTTCCTTGCAAGCTTAAAAGAGGGAAGTGTTACTGTTAATGA
GTTGTCAAACTGAAGATTCCTCCACCATCTTTCATTAAAAAGAGAGGTTCGAGAAAACGAAAGGTGTGAAAGAGAAGACTTTCTTGACGCTTTC
TCTCTTTGTGTAGCTTCTGCAATCACTCAACCACATCCCCTCTCTGTTTTTTTTTAATATTGTTATTTTCC |
Primers for UN11114 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CCGTTGCACTTCCTTAGCAT |
60.27 |
20 |
CGGTCTGGTTTCCATGAGTT |
59.966 |
20 |
266 |
745 |
1010 |
| 2 |
CCGTTGCACTTCCTTAGCAT |
60.27 |
20 |
TCCTGAACATCGACAGCAAC |
59.837 |
20 |
126 |
745 |
870 |
| 3 |
CCGTTGCACTTCCTTAGCAT |
60.27 |
20 |
TGGTTTCCATGAGTTGAGCA |
60.24 |
20 |
261 |
745 |
1005 |
|
|
