 |
Simple sequence repeat (SSR)
>UN11123
GTCAACTAGCTTCAAAATCACGTTAAAGCCCAAAGCTAGGAGATCTTTTAACAAAGCGTTTAAACAAACATCAAGGACATGAAAAGACGAGACA
GGTTAAGGAAAAGGTTTCTTAAGCTACAAAAAGGATGATGATGATGATGATTTATATAATAAATACATTCAGAACATATCCATTTCCTCTTCAG
CCTCGCCAACACAAACCTCTCTATAACAGAAAGGAGCTTAAAGAAAAAAAAACTCACTTTCTTTATTTTTAGTAAGAGTTTTGCCAGTGCTGCT
GCTGCTGGGTTTGATTCGAGGGCTGAGCTCCTCCTGCACCCTCTCTAGGGTTTTGCTGCTGGCGCTCGTGCGACATTTCTGTTTGGGACTGATA
GAAATTAGGGTAGCCATGAGATCCATAATGCTGTTGTTGCTGAGCTTGACGATACCCTCCTGCTGCTTGCTGACTCTGTTGGAGTTGCTGCTGT
TGTTGTGCTTGGAGGTTGTAGTAAGTGTTAGCTGGAACACCTGACATGGTCCTCGAACCATGCCCGTGATGCCACATCGCTGAGTTATCATTCT
GCTGCTGCTGATGCTGTTGTTGCTGCTGGAGTGCCAACAGATGACTGTTCTCTTTGTATTGAGAAGTCAGAACATCTTCATAACCGGCAGGAGC
AGACGGTTGTTGGTTAAGAGGGAAGTTTCCAGCGGATCCAACATTGGCGGAGGAGTTTCCAAATCCATAAGCGGAAGCAGGAGCTGTTGCAGAC
TGAGGCAAATTACTGGGAGAGAGATTGGCTTTGTACTGCGGAAGCAAGGCAGCTAGTTGTTGCTGGTGGTATGAACTGTTACCAGCAAACGCTT
GCTGAAAGCGGA |
Primers for UN11123 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
ATCACGTTAAAGCCCAAAGC |
59.229 |
20 |
AGCAGCACTGGCAAAACTCT |
60.201 |
20 |
266 |
17 |
282 |
| 2 |
CGTTAAAGCCCAAAGCTAGG |
59.03 |
20 |
AGCAGCACTGGCAAAACTCT |
60.201 |
20 |
262 |
21 |
282 |
| 3 |
CAAAATCACGTTAAAGCCCAA |
59.986 |
21 |
AGCAGCACTGGCAAAACTCT |
60.201 |
20 |
270 |
13 |
282 |
|
|
