Simple sequence repeat (SSR)
>UN11170
CAACCAAAATACAATCTCAGGCCGATTTCATAAAAGGATTTAAACAAAATGTTAGCTAAAACCAAGTAAATTCAAAAGATTGAACATACATGAA
TCGGGGAAAACACTGTTTTTTTGGATAATTTGCACACAAGGATAAACTTCAAATGATCAATCGAACATCATCATCATCATCATCACCATCCACA
TAAACCAATTTTTTATCACAAATTTAAAAAAAAAGCTTGAAAACGACAATGGAGTACCCCCAAATACATACTTTAGTATTAAAAGGGGCAAAAA
TTTTCACTACTAAAAAAAAGTGCCTTCTGGAGGTTGAACAAGCTTACGGTTATGCGACGTAAACATCTCCTTCTTCAGCTGTGTCAGTATTGTC
TCCATTGGGTAGTCCCTTTGCCAGTTCGCAAGAAGCCCAAATTTCTTAGGTTCCACCCCTCCTGTTTCATTGTTGACCCAAGCCATGTTGATAC
GTGAATGGAAACGGACAGGGGGAGGTTTTTCCGGGTAATCTTTGTCACAAAA |
Primers for UN11170 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CATGAATCGGGGAAAACACT |
59.79 |
20 |
TTCAACCTCCAGAAGGCACT |
59.844 |
20 |
232 |
89 |
320 |
| 2 |
ATGAATCGGGGAAAACACTG |
59.79 |
20 |
TTCAACCTCCAGAAGGCACT |
59.844 |
20 |
231 |
90 |
320 |
| 3 |
CAATCTCAGGCCGATTTCAT |
60.036 |
20 |
TTTGGGGGTACTCCATTGTC |
59.647 |
20 |
241 |
12 |
252 |
|
|
