Simple sequence repeat (SSR)
>UN11171
GGGAACTCGATCTGAGCTGCCTCCAACTAACCACAGTCGTCGAAGAGAAAGGTGAATCGAGAAAAGCGAAGAAGAAGAAGAAGAAGATGGGTGG
AGGAATGGAGACGAACAAGAACAAATTCATCGAGGATTGGGGATCGGCTAGGGAGAATCTCGAGCACAACTTCCGATGGACACGTCGCAACTTC
GCTCTCATCGGAATCTTCGGCATCGCCCTCCCCATCATCGTCTACAAGGGCATCGTCAAAGATTTCCATATGCAAGACGAAGATGCAGGCAGAC
CACACAGGAAGTTCCTATGAGCTTGTTTGCGACAACACTCTCTTCTGCAAAATGTCTCAGCTGTGTGAAGTTTTCAAGAAGCTGATGCTATCAC
TCTCCTTTTCTTTCTTTTTTTTTGCATTTTATTCAGAATAAAGAACATCTGTTGAAGGATTATAATTGCTGTTTCGAAAAGTTTGTTTTGATTG
GCAAATAAAAAAACTCAAGTTCGCCC |
Primers for UN11171 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GAACTCGATCTGAGCTGCCT |
59.709 |
20 |
TTGTTCGTCTCCATTCCTCC |
60.05 |
20 |
110 |
3 |
112 |
| 2 |
AACTCGATCTGAGCTGCCTC |
59.709 |
20 |
TTGTTCGTCTCCATTCCTCC |
60.05 |
20 |
109 |
4 |
112 |
| 3 |
GAACTCGATCTGAGCTGCCT |
59.709 |
20 |
TTGTGCTCGAGATTCTCCCT |
59.95 |
20 |
161 |
3 |
163 |
|
|
