 |
Simple sequence repeat (SSR)
>UN11180
AAGACAAAAGAGTTTTATGTAATTTAGTACCAGTAGGAATTATTTATACACATTTTATTTCTTTTTACCCAAATAATTTTATTTTTTGGTACTA
TAAACTAGGTCTAAGCACAAGAACGAGTGTTAATAGAAAACAAACATAATGAAACTAATTATTCTCTGTTTAGATTAATTACATAGAAGATCGA
TGGACCGGACGGCGTCCACCATCAAGGAGACTAGCCTGTTCTCTTTTAGCTTCCACTTGATCGTTACAAGCGACCTTTTCAACATTTGCAGCGT
CTCCCGTGCGAACATCAAGCCAGCCAATGATGTTAGCAAAAACGAGGTCAACGTTAGCGTCAGGCTCACCAGAAGTCAACCCATGTCACATCCC
TGGATAAAGTTTGATGGTTTTGTCACGTGTGCTCGCTTTCTCGAACAGAGCTTTGCTTATCTCTGGATCGGTAACTGTGTCTGCTTCACCGTGG
AGAACAAAGAAAGGTAGTGTGATCTCGTGGAGAGTGTCTTCCAGGTTCATGCTCGTTCTTAGCATCTCAAGTGCGGTTTTGAGTCTTGGTTTGT
CTTGATATATCAGCTTGTTGTTCCTTATCTCTTCGCGCTTGACCGGATCTTTGAAGGCAGCATCGATAACATCTTTGGTGGGCACGATCTTCCA
TTTTGGTATAATCTCTTCCACTCTCGTTAATAGATTAATCACTACTGGATGTGGTTTCACCTTCTCTGATATCTTACACATGGGAGCGACGAGA
ATGGCACCATTCCAGAAAGAAGGATCTTTCTTGTGAAGCAACAAAGCAACTGCACCTCCCATGGATTCTCCATACAAGAATCTGCTTTTCTCTT
TGTATTCTTCTTTCGCAGAGATTGAGGTGTAGTAGTCGTAGCAGTCGTTTACTAAGTTACCGAACTTCTTGATATAACAACGAGCTCCTTTGGA
CCGACCATGACCTTCGTAGTCCATTCCAAATACCGCATATCCTGCCGAAGCCAGTCGTATCCCGCATTCACTCATGAAGCCGCTGCATTCCATT
CCGTAGCCATGGCAGAGGAAGATGAGAGCTCTGGGAGAAGAATAAGATGGAACCCATCTGCAAGCGAACAACTCGACGCCTCTCGAGTTTCTTA
TGTATTCCTCATCGTAATCAAACATTAACTTCGTCATGCTCCGTGTGTGTGTATATATATATATGCTTTGAAATATTCTTCTGTTTATTGTCGC
GGTGGAGGGAGAGAAAACGAGTTCTTTGCGTTTGCGAGAGAGAGAGAAGAGGGCCAGACGGAAGATTGAAAAGGCGGTTATTATCTAATTTGTA
GTGATCC |
Primers for UN11180 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TAACTTCGTCATGCTCCGTG |
59.864 |
20 |
TTTTCAATCTTCCGTCTGGC |
60.192 |
20 |
141 |
1154 |
1294 |
| 2 |
TAACTTCGTCATGCTCCGTG |
59.864 |
20 |
AACCGCCTTTTCAATCTTCC |
60.431 |
20 |
148 |
1154 |
1301 |
| 3 |
CATCTGCAAGCGAACAACTC |
59.596 |
20 |
TTTTCAATCTTCCGTCTGGC |
60.192 |
20 |
206 |
1089 |
1294 |
|
|
