 |
Simple sequence repeat (SSR)
>UN11216
GTAAAAGATCAACCATAATGATCTATCTTATTAAAAATGCAAAAGAAAAATAAAAAACGTCAACCATCTTCGTATCTTACAAACCATAATAATG
TTTTCAAACAGGACGATAAAGTACGATTAAGAAAACGACAACAACAACAACCACGAGAGTAGAGCAACTAGCTTATTGTTTGCGAGCAAGCAAA
GGATCTCTCGATGAGTCTGGCAAGTTCTGGAGTAATCATAAGACCCCCAGGAGTGCATGGGGATTTATCCTTAGGAGGGGGAGGCTGACCTCTC
ACCAAATAATCGGATGCGTATTCCCAATGCTCAGATTCTTCAACTTTAGTATAGCCAATGGCATGAAACTGGGTGGTGAGGGATGTCATATCTT
TGTAATTGAAGGGTAAGCGACTAGGAAGAACATCTCCGAGGAACTTAGATTCATCCCAAACGACGAAACTCTTGCCGCTCTCACTCCACGAGAC
AACTGAATCAACTGTAGGATCATCCAACATATCGTACACGTCTCTGATGAAAAGGGGGGGAGGGCATCGAATTGATGAGGAAGGGGGACACTCC
TTCTTGGCAAGCCTAGCCATCTCTTGGTAGCAAGAAAGGCTGATAAAGCGAATAAGTCCATCATCATTGCTACTGTCCAAGCCCTTGTTGTTGT
CGGTCTCAATCTTTCTAATGAGGTCGTCTTGTGACGGTTTAAGGTCAGGCGGCCTCTCATAAAATAAGGGCATGCGTATTCGCATTGCTCATGA
GATTGAGATTGAGATTGTGAAAAGCCCAAGTATCCCAGGCACCCTCCGGGAAGAAGAAGAGCTTTTCTAAACTCCACGTCATCCCAAACGATGA
AACTCTTCCCGCTCTCGCTCCACGAAACTATTGAATCTGTTGAAGGATCATCCACCATCTCATACAATTTACTTCGGCGATCATAGACAAAGGC
TTCTCCCTTTTTGTCACGATACATCCTTCCTCCCTCCTAATGAAACCCCTCTTCGATTTAATCTTCGTTCGTTCCTTCCTTCCTTCCTTCCTCT
GAAACCAAACCTAAGCTAGAAACAGAGACTCGACTAGGGCTTCCTTTATACGAAACAGATAAAAGGTCC |
Primers for UN11216 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GCTTCTCCCTTTTTGTCACG |
59.853 |
20 |
GGAAGCCCTAGTCGAGTCTCT |
59.104 |
21 |
140 |
939 |
1078 |
| 2 |
AACTCCACGTCATCCCAAAC |
59.827 |
20 |
GGAAGCCCTAGTCGAGTCTCT |
59.104 |
21 |
257 |
822 |
1078 |
| 3 |
TCCCTCCTAATGAAACCCCT |
59.761 |
20 |
GGAAGCCCTAGTCGAGTCTCT |
59.104 |
21 |
108 |
971 |
1078 |
|
|
