 |
Simple sequence repeat (SSR)
>UN11240
GGGGGGAAAGGGAAAACATGCATTACCTCAAGAGTTTACCCAAAATTGGCAATAGGAGAAAATACGCATCTCTTTGTATTTAACAATGGATCTC
AGAATGTTGATGTTTTAAGCTTAAGTGCTTGGAGCATGAAGTCTTCTCTCTAAAATCACTTCTTCATGTGTAAGAAATTCTTGAAACTCTTGGC
GCGTCTTTTCTTTTATTTAGTCATCATTCTCATCATCATCATCATCATATTCATCTTCATCAGCAAGAGCCTCTCCAGTAAACCATGAAACTGC
GTGAGGGATCAGTTTGTCTCTGATTGTCACAGCAATGTCATAGTCCTGATCCGTCAGGTTTTGGAGTTCTTCATCCATAGTTGTAAAACATTCA
TCAACTTCATCAATCTCAGGGGGCTTGAAGAAGTTAAAGAAACTCTCGCAGTTTTCGGTTTTAGTCATGGGGATGTTGTTCACTTTCTTTGTCC
CCTTCTTTGGCCTCTTCTTGACAACAACCTTATGAGTCAAACACTTACCTGGACACCATTCTATCTCCGTTCCAATCACTTTATCAAGAACAGG
GCCATCATCATCGTCATCGGTCACATGGTAAGTTTTAGACAGAACCGAGTTCTTGAAGTAAGGATTAGGATCAAAGAGAAACTCCAGCTTGAAG
TTTCTTGAACTGTTTTCTACTCTGCAACATCTGATGTCTTTGAGATACTTCAAAGCTCCCTCATCTCTTTCGGTTATCTCGTTTGCTAGCATCT
CGTTGGTTTTCATTGCAATCAACCAGAAGTTAGGTACTCCTCCTTTCTCCGTCTCAGCTTCAGCCACACCATTCACAATTTCATATCTCTTATC
AAAAAGCGGCTTGTAGAGATTGTTGTATTTTGCTTCCAATGCAGATTTTTCTTGAAGAAACTTCTCCTCGAGTTCGTCGTGTTTGACCTGAATG
TCCTTGAGAAACAGAACACGTTTGGTGACTTTAGGTGAGAGTTTCTTCGTATCAAAGGTTCGTTTTATTGTTAGGTTCTTAAGATCCTCGGTAA
GATCAGGATCCTCTGGAATAATATCTAAGGCATCAGATGAATCGCCTCCACTGTTATGAACAGCTTCGATGGACGTGATGTTGTTCTCTTCGTT
GCTCATGTTTCGTGAGAA |
Primers for UN11240 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TGGCGCGTCTTTTCTTTTAT |
59.853 |
20 |
GATCCCTCACGCAGTTTCAT |
60.081 |
20 |
108 |
185 |
292 |
| 2 |
TGGCGCGTCTTTTCTTTTAT |
59.853 |
20 |
GAACTCCAAAACCTGACGGA |
60.088 |
20 |
167 |
185 |
351 |
| 3 |
TGGCGCGTCTTTTCTTTTAT |
59.853 |
20 |
CATCCCCATGACTAAAACCG |
60.184 |
20 |
267 |
185 |
451 |
|
|
