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Simple sequence repeat (SSR)
>UN11298
AAAAAAAAATTAACTTCATTTATTAAATTATAACAACAACAAATTTCCCACTATACACCAACGCTCTACAAACCCAAAACAAACAAAGTAAAAG
CCAACTTAAATTAAAAGATTAACAATACTTCCAAATAGTCATATTCAAATAAGTGATGATTGTTTCTTCCTCTGATGATGATGATGATGATGAT
GATGATGATGATGATGATGATAATGACATGGTGGTGGTGCCCTCGAGCTATATATAGGATCATGAATCAGTTGAATTGGTGGTCGTGATTTGGG
TCAGACCATCCCCAGTAACCGGCCGACGTCGTTTCATCAATGCCATTAAACATGTTACAGAAGCTCTCTTCTTGAACCACTTCATTATTCTGTT
GATGATGGTCATGATTATGTGTAGAAGACGGAATCGATGAAGGGAAAAGGTTTTTGATCGTGTTCACATGTGTTGTAGTGGTCTCTCTAGGAAT
CTCCAGATTTATGTCTGAGCTATTTTCTGTGCTTCCATTGTTGCTCCATGAAGCTTCTGTTTCCCTCTTTATTATGCTTGCTTCGTTACAATCT
TTGTTCTTTAAAGACATTACCTCAGCAAGGAGTTTCTTGTTGTGGGCAAGAAGAGAATCATTGTCAGACTTAAGAGAATCAAACTGTTTCTTGA
GTGCATCATAGTCTCTTTCGAGCTGTCTAGTCTTCCACCTAGCTCTCCTGTTTTGAAACCAGATCGCTATTTGCCTCGGTTGCATCCCCAATGC
TTTAGCTAGTTGTATCTTCCTCTCTGGATCAAGCTTGTTACCAAGCTCGAAGCTCTTTTCTAATACCTTAACTTGCTCTAATTGCAGCCTCTTC
TTCTTCTCTCCAAGCATCATATGTGACCCATCGTCTGATAAATTCTCCTCATCAACAGATTGATGAGGATCGTCTCGCACGTTCGTTAATGACA
TAGATCTGTTCATCATGTAGTTTCCTCCTCCATTGAAGGGATGAGGAGGAAGACAAGAAGGGAGCTGATCAGGGGTAATGTCTTCATGAAGTTG
TTGGAACATAAAACCATGTTGAGGAAATGCCATTTCCAATCTAAATCCTGCGGCTGCGTCTGTGGTTGGATCAAACACATGCAAATTAACTCAA
CCTGCAGTGAGTGATATATTTGGATTGGGAAGTTATCAGCTAGGAGTGTTCAAATGCTTATATTTTGGAAATGAAGAACAAATGAATCTCC |
Primers for UN11298 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ACCAACGCTCTACAAACCCA |
60.55 |
20 |
GGTTACTGGGGATGGTCTGA |
59.779 |
20 |
246 |
57 |
302 |
2 |
CACCAACGCTCTACAAACCC |
60.55 |
20 |
GGTTACTGGGGATGGTCTGA |
59.779 |
20 |
247 |
56 |
302 |
3 |
ACCAACGCTCTACAAACCCA |
60.55 |
20 |
GTCTGACCCAAATCACGACC |
60.372 |
20 |
232 |
57 |
288 |
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